Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02103 ATGTCTATGCTCGCCATAATTCTGCGCCCTGCTGCAATTTATCCCTTCGTGTCAAGTTTTAGGGTTCCAAGTGCTGCAATGTTTCCTCCAAGCTCCACGTCCATTTTAGTAGTGGCAGTTTTCAAGATGAACATCATCAATGTTATTCTGATTCTCCCTTTCCTATGTTTCTTTCTTCTGAGTACTTCCTTCATTAAAGCATCTGCATTAAATGCAACCTATGAGTCTGATAGAATAATCGATCTTCCTGGTCAACCTTCCAGCCCCTCACTCTCACACTTTTCAGGTTACATCACTGTCAATGAAAACCATGGAAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAGTCTGAACCCTCCAAGAAGCCTCTGCTTCTCTGGCTCAATGGAGGACCCGGATGCTCCTCTATTGGGTATGGTGCCGTTGTCGAGATTGGACCTCTAATGGTCGACAAAAACGGGGAAGGACTACATTTCAACAAATATTCTTGGAATCAAGAAGCAAATTTGTTGTTTGTGGAGTCCCCTGTTGGAGTTGGATTTTCTTATACTAATACCTCTTCTGACACCATATTAGAGGATAACTTTGTGGCTGAGGATGCCTACAATTTCTTGGTGAATTGGCTAGAAAGATTCCCACAGTTCAAATCCCGGGACTTTTTTATATCAGGAGAAAGCTACGGTGGACACTATATCCCTCAGCTTGCAGAGTTAATCTTTGATAGAAACAAAGATAGCAACAAATACCCCTTCATTAATCTTAAAGGTTTTATTGTTGGTAACCCAGAGACTGATTATTACTATGACAATAAAGGCCTTCTGGAATATGCATGGAGCCACGCAGTTATATCAGACCAGCAATATGAGAAAGCAAAAGAAGTATGTGATTTTAAACAATTTGAGTGGTCAAATGAATGCAACAGGGCCATGAACGAAGTCTTCCATGATTACTCAGAAATTGACATATACAACATTTATGCCCCGACATGTCCTTTAAACAGCACATCCTCAATAGCTGATGAGAGCAACAGTAGCGGCCATGAATCATTTACCAAGGTGAGAAATGATTATAGGGAAAGGAGGATGAGAATTTTCGGAGGCTATGACCCTTGTTTTTCCAATTATGCAGAAGAATATTTCAATAGAAAAGATGTTCAATCATCTTTTCATGCAGATACTAATAGAGCCACTAAGGTGGCATGGAAGGTTTGCAATAATGCCATATTGAGGGCTTACAACTTCTCTGTTTTCTCGGTCCTACCTATCTACACCAAACTCATCAAGGGTGGTCTTAAGATATGGATTTACAGTGGAGATGCAGATGGGAGAGTGCCGGTGATAGGGACACGATATTGTGTTGAGGCTCTGGGATTACCTCTCAAGTCTAGGTGGCGAACATGGTACCATGATAATCAGGTTGGGGGAAGAATAGTGGAATATGAGGGATTGACATATGTGACAGTGAGAGGGGCTGGTCACTTGGTGCCATTGAACAAGCCCACTCAAGCTCTCTCCCTTATTCATTCTTTCTTAACAGCCAACCATCTTACTACTCCTGGATAA 1563 0.4178 MSMLAIILRPAAIYPFVSSFRVPSAAMFPPSSTSILVVAVFKMNIINVILILPFLCFFLLSTSFIKASALNATYESDRIIDLPGQPSSPSLSHFSGYITVNENHGRALFYWFFEAQSEPSKKPLLLWLNGGPGCSSIGYGAVVEIGPLMVDKNGEGLHFNKYSWNQEANLLFVESPVGVGFSYTNTSSDTILEDNFVAEDAYNFLVNWLERFPQFKSRDFFISGESYGGHYIPQLAELIFDRNKDSNKYPFINLKGFIVGNPETDYYYDNKGLLEYAWSHAVISDQQYEKAKEVCDFKQFEWSNECNRAMNEVFHDYSEIDIYNIYAPTCPLNSTSSIADESNSSGHESFTKVRNDYRERRMRIFGGYDPCFSNYAEEYFNRKDVQSSFHADTNRATKVAWKVCNNAILRAYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCVEALGLPLKSRWRTWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPTQALSLIHSFLTANHLTTPG 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02103 520 Gene3D - 419 512 - -
Phco8g02103 520 Gene3D - 371 408 - -
Phco8g02103 520 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Phco8g02103 520 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Phco8g02103 520 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Phco8g02103 520 PRINTS Carboxypeptidase C serine protease (S10) family signature 483 496 IPR001563 GO:0004185|GO:0006508
Phco8g02103 520 SUPERFAMILY alpha/beta-Hydrolases 75 514 IPR029058 -
Phco8g02103 520 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 79 500 IPR001563 GO:0004185|GO:0006508
Phco8g02103 520 FunFam Carboxypeptidase 419 513 - -
Phco8g02103 520 Pfam Serine carboxypeptidase 83 512 IPR001563 GO:0004185|GO:0006508
Phco8g02103 520 ProSitePatterns Serine carboxypeptidases, histidine active site. 483 500 IPR033124 GO:0004185
Phco8g02103 520 Gene3D alpha/beta hydrolase 71 340 IPR029058 -
Phco8g02103 520 FunFam Carboxypeptidase 73 332 - -
Phco8g02103 520 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02103 Phco-Chr8 22480110 22483765 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02103 8 22480110 22483765 Phco8g02103 8 22480110 22483765 ECH