Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02102 ATGACGCTGATTGCACTCTTCCTCACTGCCACCAAGCTGGCCGGAGCTCTCTTTACCCTCACCGTCGCCGCCAACGCCATCTCCTACTCCCGCTTCCGCAAGAACAATCTTCGCCGATTCCGCTCCCCTATCGACGAATCCTCCGAAACTCTCGCCGACTTCAACTTCGCCGAAGAGGAGTTTTTCTTTGGTTTGGCTACAGCACCGGCTCATGTCGAGGACAGGCTTGATGATGCTTGGATCCGGTTTGCTGAGGAAAAGAGTGACGACTCCGAGGGGAGGCAGACAGTGGATGCCGTGATGGCTTCTGCTTCTGGCGACGGTGGGTCCCAGCGGGCCGCGACGTCTCCGCGGGGCAGGAAGCCTCTTAAGGTCGCTATGGAGGCCATGATTAGGGGATTTGAGAAGTACTTGGAAGTGGAAGGAAAAGAAGGGGAAGTAGAACCTCGTTCTAATGTAACTGCTTGGCATAATGTTCCACGCCCGGAGGAGAGGTTAAGATTTTGGTCCGATCCTGAAACAGAAATAAAATTGGCCAAGGATACCGGTGTTACTGTTTTTCGCATGGGAATAGATTGGACAAGAATCATGCCAGTGGAGCCAGTAAACAGCCTTAATGAATCTGTTAACTATGCTGCGTTGGAACGGTATAAGTGGATTATCAATAAGGTTCGATCATATGGAATGAAGGTGATGCTTACTCTTTTCCATCACTCACTTCCACCCTGGGCTGGTGAGTATGGCGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGACTTTACCAGGCTTGTTGTAGACAGTGTATCAGATTTGGTAGACTATTGGGTAACATTTAATGAGCCCCACGTCTTCTGTATGCTTACTTACTGTGCTGGAGCTTGGCCTGGAGGTCATCCTGATATGCTTGAGGTCGCAACTTCAGCACTTCCAACCGGTGTTTTTCAACAGGCCATGCATTGGATGTCTGTTGCACACTTAAAGGCATATGACTACATCCACGGACTAAGTAACCCATTAAATCCAATAGTTGGTGTAGCACATCATGTGTCATTTATGAGACCCTTTGGTTTGTATGACGTTGCTGCTGTTTCTCTGGCTAATTCATTGACTCTCTTCCCATACATTGATGGAATATCTGAAAAGCTGGACTATATAGGCATAAACTACTATGGCCAGGAAGTGGTTTCGGGTGCAGGCCTGAAGCTGGTGGAAAGTGATGAGTATAGTGAATCTGGTCGCGGGGTATACCCTGATGGCTTATACCGCATGTTGCTTCAGTTCCATGAAAGATACAAACATCTAAACATTCCCTTCATCATCACTGAAAATGGTGTTTCAGATGAGACAGATTTGATCCGCCGGCCATATTTCTTGGAGCATTTGCTTGCTGTTTATGCTGCCATAACCATGGGTGTACGTGTACTTGGTTACCTGTTTTGGACTATTTCTGATAACTGGGAGTGGGCCGATGGATATGGTCCCAAGTTTGGACTTGTTGCGGTTGACAGGGCAAATAATCTTGCACGGATCCCTCGCCCCTCTTACCATCTATTTTCTAAAATTGTGAATACCGGCAAAGTTACACGTGAAGATCGTGAAAGAGCATGGGATGAACTCCAAAGAGCTACCAAAGAGAAGAAAACAAGACCATTTTATCGGGCTGTGAATAAACACCGTCTAATGTATGCAGGTGGACTTGATGAACCTGTACAGCGACCTTATATAGATAGAGATTGGCGGTTCGGTCATTACCAGATGGAAGGACTCCAGGATCACCTCAGCCGCTTCTCTAGATTCATTATTCGACCCTTTTCCCCCAAAAGGAAAACAAAATCTGAGGAGAAGAATCCCAAATTAATTCTTCAGCCTCTTGAAACTTAA 1887 0.4685 MTLIALFLTATKLAGALFTLTVAANAISYSRFRKNNLRRFRSPIDESSETLADFNFAEEEFFFGLATAPAHVEDRLDDAWIRFAEEKSDDSEGRQTVDAVMASASGDGGSQRAATSPRGRKPLKVAMEAMIRGFEKYLEVEGKEGEVEPRSNVTAWHNVPRPEERLRFWSDPETEIKLAKDTGVTVFRMGIDWTRIMPVEPVNSLNESVNYAALERYKWIINKVRSYGMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVDSVSDLVDYWVTFNEPHVFCMLTYCAGAWPGGHPDMLEVATSALPTGVFQQAMHWMSVAHLKAYDYIHGLSNPLNPIVGVAHHVSFMRPFGLYDVAAVSLANSLTLFPYIDGISEKLDYIGINYYGQEVVSGAGLKLVESDEYSESGRGVYPDGLYRMLLQFHERYKHLNIPFIITENGVSDETDLIRRPYFLEHLLAVYAAITMGVRVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFSKIVNTGKVTREDRERAWDELQRATKEKKTRPFYRAVNKHRLMYAGGLDEPVQRPYIDRDWRFGHYQMEGLQDHLSRFSRFIIRPFSPKRKTKSEEKNPKLILQPLET 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02102 628 PRINTS Glycosyl hydrolase family 1 signature 497 509 IPR001360 GO:0004553|GO:0005975
Phco8g02102 628 PRINTS Glycosyl hydrolase family 1 signature 440 448 IPR001360 GO:0004553|GO:0005975
Phco8g02102 628 PRINTS Glycosyl hydrolase family 1 signature 473 490 IPR001360 GO:0004553|GO:0005975
Phco8g02102 628 PRINTS Glycosyl hydrolase family 1 signature 452 463 IPR001360 GO:0004553|GO:0005975
Phco8g02102 628 PRINTS Glycosyl hydrolase family 1 signature 383 397 IPR001360 GO:0004553|GO:0005975
Phco8g02102 628 Pfam Glycosyl hydrolase family 1 173 358 IPR001360 GO:0004553|GO:0005975
Phco8g02102 628 Pfam Glycosyl hydrolase family 1 380 526 IPR001360 GO:0004553|GO:0005975
Phco8g02102 628 SUPERFAMILY (Trans)glycosidases 155 532 IPR017853 -
Phco8g02102 628 Gene3D Glycosidases 137 538 - -
Phco8g02102 628 MobiDBLite consensus disorder prediction 609 628 - -
Phco8g02102 628 PANTHER GLYCOSYL HYDROLASE 62 371 IPR001360 GO:0004553|GO:0005975
Phco8g02102 628 ProSitePatterns Glycosyl hydrolases family 1 active site. 440 448 IPR018120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02102 Phco-Chr8 22471484 22476085 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02102 8 22471484 22476085 Phco8g02102 8 22471484 22476085 ECH