Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02031 ATGGAGGAAGTTAACGTTGTGGAAACTAAAGATGGGACTGTCTCAGTAGCTTCTGCGTTTGCTGGTCACCATGAAGTTGTGCAGGATACAGACCACAAATTTGTAACGAAAGCTGTTGAAGAAGCATATAATGGGGTAGATTGTAAAGATGGAGGCCCATTTGGTGCTGTTATAGTTTGTAAGGGTGAAATAGTTGCTAGTTGCCACAATATGGTTCTGAGAAACACAGACCCAACTGCTCATGCTGAGGTGACAGCAATAAGAGAGGCATGTAAGAAGCTTAACCAAATAGAACTTTCAGACTGTGAAATATTTACTTCCTGTGAGCCTTGCCCCATGTGCTTTGGTGCAATCCACCTTTCTCGAATTAAGAGGTTAGTTTATGGAGCAAAGGCTGAGGCAGCAATTGCTATTGGGTTTGATGATTTTATTGCAGATGCACTGCGAGGTACTGGATTCTATCAGAAAGCAACACTGGAAATCAAAAGAGCTGATGGTAATGAAGCCATGATTGCTGAAGAGATCTTTGAGAAAACAAAGACAAAATTCCAAATGTATTAG 561 0.4118 MEEVNVVETKDGTVSVASAFAGHHEVVQDTDHKFVTKAVEEAYNGVDCKDGGPFGAVIVCKGEIVASCHNMVLRNTDPTAHAEVTAIREACKKLNQIELSDCEIFTSCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKATLEIKRADGNEAMIAEEIFEKTKTKFQMY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02031 186 FunFam tRNA-specific adenosine deaminase 29 185 - -
Phco8g02031 186 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 23 133 - -
Phco8g02031 186 CDD nucleoside_deaminase 38 142 - -
Phco8g02031 186 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 143 IPR002125 -
Phco8g02031 186 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 30 129 IPR002125 -
Phco8g02031 186 Gene3D Cytidine Deaminase, domain 2 22 185 - -
Phco8g02031 186 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 81 118 IPR016192 GO:0008270|GO:0016787
Phco8g02031 186 SUPERFAMILY Cytidine deaminase-like 24 144 IPR016193 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02031 Phco-Chr8 21690089 21692630 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02031 8 21690089 21692630 Phco7g02612 7 45077070 45079169 PCT