Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02008 ATGTTTAGATTAAAGAATTGTGAAGGGCCTTTGCGGTTCTTGTATCAGCAAACTCGGCATCACCCTCACCGTAACAATCTTATGGCTTATTTAGTAGGTTTTGATCCTTGCTCCCACTTGAGCAGGGCCTTTTCGCCGTACCCTTCTCTTTCTTCTTCGGATCGTGGTTGCTACCTGCCTTTCCCTCTTCTCCATAAACTTGTTTATGCTAATGTTGGGGTTAGAAGAAGCATTGGTTTTGGTCGTAGAGGTTGTAGCTTTGATACTAGTTGTAGTTGCGGTGGTAATGGTGATAGGAAGTTTGTGAGGGGTAAGGCAAGGTCCCTTCGCTTTGCATCGAATCGTCGCCAGCCGATGTTGGCTGATCTGGAGCAAAGGAATTCTGTTAGGAGTGATGAAACTGATGCTACTTTGGTCAAGATTGATAATGGATCTATAAATGGAAGTCCTGCTAAACCTCCTTGTTTCAATGATCACCGGTTGTCCCAGAAACTTGTTGTTGCTGTTGATGTTGATGAGGTATTAGGAAACTTCGTGTCAGCTCTCAACAAGTTCATTGCAGATCGATATTCATCAAATTATTCAGTTTCTGAATATCATGTGTACGAGTTTTGTAAGATATGGAATTGTTCACGTGATGAAGCTGATATCCGTGTTCATGAATTTTTTAAGACACCATATTTCAAGTCAGGGATCCACCCTCTTCCAGGTGCTCACACGGCTCTACAGAAGTTATCAAGATTTTGTAGCCTATCAGTTGTAACTTCACGGCAGAATGTGATTAAGGATCACACAATCGGGTGGATAGAGAAGAATTTTCCTGGACTGTTTCATGAGATTCACTTTGGTAACCACTTTGCTCTTGATGGTGTGTCAAGACCGAAGTCAGAAATTTGTAGGTCCTTAAATGCCAAGGTTCTTATTGATGATAACCCGAGATATGCCTTAGAATGTGCTAATGTTGGAATTAGAGTCCTGCTTTTTGACTATGAAAATTCATATCCTTGGTGCAAGAGTGAATCTACTGAAGAGCACCCTCTGGTGACCAAAGTTAAGAACTGGGAAGAAGTGGAACAACAATTAATGTCATTGATTGCCTCTTAG 1104 0.4158 MFRLKNCEGPLRFLYQQTRHHPHRNNLMAYLVGFDPCSHLSRAFSPYPSLSSSDRGCYLPFPLLHKLVYANVGVRRSIGFGRRGCSFDTSCSCGGNGDRKFVRGKARSLRFASNRRQPMLADLEQRNSVRSDETDATLVKIDNGSINGSPAKPPCFNDHRLSQKLVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVYEFCKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAHTALQKLSRFCSLSVVTSRQNVIKDHTIGWIEKNFPGLFHEIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYALECANVGIRVLLFDYENSYPWCKSESTEEHPLVTKVKNWEEVEQQLMSLIAS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02008 367 Gene3D - 201 364 IPR023214 -
Phco8g02008 367 PANTHER NUCLEOTIDASE YQFW-RELATED 78 366 - -
Phco8g02008 367 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 165 361 IPR010708 GO:0008253|GO:0009264
Phco8g02008 367 SUPERFAMILY HAD-like 158 362 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02008 Phco-Chr8 21451371 21454661 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02008 8 21451371 21454661 Phco8g02008 8 21451371 21454661 ECH
Phco8g02008 8 21451371 21454661 Phco7g02624 7 45166709 45170531 PCT