Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01957 ATGGCGGAGGATTTCTCCAAGGCGGTCGACGACGGACTGAAGCTCTCCAAGCGTATATACTTCGGGAAGGACAGGGCGGTGGCGCCGCCGAAACCTCCGCCGCCGATGGCACGTTCCGCAAAGGCTTTCCTGCCTTCCGCGCCGATGGTCTACGCGGTGATCTGCGATCCAGGAATCGTGGATAACCCCGACATCCCCAGCTACCAGCCGCACGTGCACGGAAGGTGTGATCCTCCGGCGCTGATTCCGCTTCAGATGACCGCAATTCAGATGGAAGTTGACTGTCACCACGAAACCGCGTTTCTCACGGTTTCCGGCACTTGGAGACTCCACTGCATCAAGGGAAGCCGCTCCTGCGATTGCCGTGTCGCTATTCCCATGGGCCTTCAGGGTTCAATTCTAGGTGTTGAGGTTGGCGTGCCTAGAAAATCATATTCTACTGAACTGGTTGTTATGGAAGATGACAAAGGAAACCAAAACTTCGCGCCACCTCAAAACGGAGGGTTTCTCACCCCTAATATATTTACTTTAACTATACCACAGATTGATGGGGGTTCCAATTTGTCGATTAAAATTCGTTGGTATCAGAAAATAGTGTACTCCAATGGCCTGTTCTCTTTAGATGTGCCTTTTAACTTTCCTGATTTTGTCAACCCTGCGGGGAAGAAGATACCTAAAAGAGAAAAGATACGAGTTAATTTGGATGCTGTTACTGGAGGTGAGCTTCTGTGCAAGACAATAAGCCACCCAATGAAGCAAGTGAGTCGTCATGTGGGTAGTACGGCCTTCTTGTATGACTCTGATGTTCTATCGTGGTCTAAAGTTGATTTTAGCTTTTCATACGCTGTTTCCTCGAGTCATATGACTGGTGGTGTTGTTTTGGAATCTGCATCCGGGCATGATCTTGATCAAAGAGAAATGTTCTACATGTATCTTTCTCCAGGAGATATTCAATGTGAGAAGGTATTCAAAAAGGAAATAATATTCGTTATTGACATTAGTGGTAGCATGTTGAGAAAGCTAATTGAAGACACAAAATATGCACTTTTGGCCGCTCTCTCCAAGCTTAATCGTGACGATTCATTTAATATTATAGCCTTTAATGGAGAGACTTATCTATTTTCCAAATCGATGGAATTGGCTTCCGAGGATGCTGTTAAAAGGGCTACTGAGTGGATTAGCGTGAACTTTGTTGCCGGAGGTGGTACAAATATTTCACGTCCCTTAAACACGGCAATAGAGATGCTATCCGATGCTCAAAATTCAGTTCCAATAATTTTCCTAGTTACAGATGGAACTGTTGAAGATGAGAGACAGATTTGTGCTATGGTAAAGAATCGTATGATCAATGGAGAGTCAATATGCCCTCGAATTTACACTTTTGGCATTGGTTTATTCTGCAATCATTATTTCTTGCGGACCCTTGCAATGTTTGGTAGGGGCCAATACGATTCTGCAATGGATGTTGATTTGATTGAGCCTCGAATGCTGACACTGTTTGACAAAGCTTCATCTCTCATTCTTGCAAATATCAAAGTGGATTCATTGGATGATCTTGGTGAACTAGAGGTATACCCTACTCGTATTCCAGATCTTTCATCAGAGGGTCCACTGATTTTATCTGGAAGATACAGGGGGAATTTTCCTAAAACTCTTAAAGTCGAAGGTATTTTGGCTGATTTCAGTAATTTTGTAGTAGATATGAAGATACAAAATGCCAAGGACATGCCTGTACAAAGGGTTTCTGCAAGAGATCAAATACATCATCTTACCGCTCAAGCATGGTTTTTGGAAAATAAACAGCTAGAACAGAAGGTTGCAAAACTGAGCCTGCAGACGGGTTTTATCTCTGAGTACACACGAATGGTTTTACTGGAGACCGATCATATAAAGAAAGTCAAGGAATCGGCCGGAACGAAAGAAGCGTCAAAAAAGAGCAATGGTCAGTTTGAGGCACCTGTCCAAGGGCAGAGAATGATTTTACTACCACATTTGGGTATCGGCTTTGGCAACTTAACTGCAACTGCTGAAAATACTCCTCCCGGATATGAATCTAAATTGCCTGAAGTTCCTGAAATCTTTAAGGCGGCCACAAATTGTTGTGAAACGCTGTGCAGTTACTGCTGCTGCATGTGCTGCATCCAGTGCTGTGCCCGGTTAAACAACCAATGTGCAACTGCATTGACACAACTTTGCATTGGTCTAGGATGCTTTGGCTGTGTCACTTGTTGTTCAGAAGTATGCTGTTCTGGAAACGAAGGCTGA 2265 0.4415 MAEDFSKAVDDGLKLSKRIYFGKDRAVAPPKPPPPMARSAKAFLPSAPMVYAVICDPGIVDNPDIPSYQPHVHGRCDPPALIPLQMTAIQMEVDCHHETAFLTVSGTWRLHCIKGSRSCDCRVAIPMGLQGSILGVEVGVPRKSYSTELVVMEDDKGNQNFAPPQNGGFLTPNIFTLTIPQIDGGSNLSIKIRWYQKIVYSNGLFSLDVPFNFPDFVNPAGKKIPKREKIRVNLDAVTGGELLCKTISHPMKQVSRHVGSTAFLYDSDVLSWSKVDFSFSYAVSSSHMTGGVVLESASGHDLDQREMFYMYLSPGDIQCEKVFKKEIIFVIDISGSMLRKLIEDTKYALLAALSKLNRDDSFNIIAFNGETYLFSKSMELASEDAVKRATEWISVNFVAGGGTNISRPLNTAIEMLSDAQNSVPIIFLVTDGTVEDERQICAMVKNRMINGESICPRIYTFGIGLFCNHYFLRTLAMFGRGQYDSAMDVDLIEPRMLTLFDKASSLILANIKVDSLDDLGELEVYPTRIPDLSSEGPLILSGRYRGNFPKTLKVEGILADFSNFVVDMKIQNAKDMPVQRVSARDQIHHLTAQAWFLENKQLEQKVAKLSLQTGFISEYTRMVLLETDHIKKVKESAGTKEASKKSNGQFEAPVQGQRMILLPHLGIGFGNLTATAENTPPGYESKLPEVPEIFKAATNCCETLCSYCCCMCCIQCCARLNNQCATALTQLCIGLGCFGCVTCCSEVCCSGNEG 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01957 754 Gene3D von Willebrand factor, type A domain 324 501 IPR036465 -
Phco8g01957 754 SMART VWA_4 324 504 IPR002035 -
Phco8g01957 754 Pfam von Willebrand factor type A domain 325 483 IPR002035 -
Phco8g01957 754 ProSiteProfiles VWFA domain profile. 326 516 IPR002035 -
Phco8g01957 754 Coils Coil 592 612 - -
Phco8g01957 754 SUPERFAMILY vWA-like 325 492 IPR036465 -
Phco8g01957 754 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 3 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01957 Phco-Chr8 20784914 20793159 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01957 8 20784914 20793159 Phco8g01957 8 20784914 20793159 ECH
Phco8g01957 8 20784914 20793159 Phco7g02671 7 45675215 45681576 PCT