Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01928 ATGCTAAAAAGTTCAACCTCTCCTTCTCTCACAGTTTTCAGAACCGTCCCTCTCAAATCACCCAAGCACCACAACCATTTCACTTTCCTCACTTTTCAAACAAGTTTCACCGGAGTAAGCAACTTGCAGGGGAAAGGAATGGCTTCAACTTCAGCACTTTCAATGTCTCTCCCACTAAATCACACTACCCAGAAGAGGGTGGTGCCCACTTCCGAGGCATTGTTCAAGGCACCGTTAACTCTGCCAGCTTCAAAGGGTGTGGCACTGTCCAAATCCAATGGGAGGTTTCAGGTGAGGGCATCCATGAAAGAGAAAGTTGTCACGGGTTTGACTGCAGCTGCATTGACGGCTTCCATGATGGTTCCCGATGTGGCTGAAGCCGCCGTATCGCCTTCTCTCAAGAATTTCTTGCTCAGCATCGCCGCTGGTGGAGTTGTGGCTGCAGCAATTGTTGGTGCCGTCATTGGGGTTTCCAACTTCGATCCCGTCAAGCGAAGCTGA 501 0.501 MLKSSTSPSLTVFRTVPLKSPKHHNHFTFLTFQTSFTGVSNLQGKGMASTSALSMSLPLNHTTQKRVVPTSEALFKAPLTLPASKGVALSKSNGRFQVRASMKEKVVTGLTAAALTASMMVPDVAEAAVSPSLKNFLLSIAAGGVVAAAIVGAVIGVSNFDPVKRS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01928 166 Gene3D Single helix bin 128 166 - -
Phco8g01928 166 Pfam Photosystem II reaction centre X protein (PsbX) 129 166 IPR009518 GO:0009523|GO:0015979|GO:0016020
Phco8g01928 166 PANTHER OS07G0673550 PROTEIN 47 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01928 Phco-Chr8 20407112 20407612 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01928 8 20407112 20407612 Phco8g01928 8 20407112 20407612 ECH
Phco8g01928 8 20407112 20407612 Phco7g02697 7 45949080 45949439 PCT