Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01889 ATGGCACTGAATTACCCTTCTTCAACCTACTTCATACTACTAGTAGTAACCATAACCCGTTTGATATACACAGTGGGCAAAACCGAGCAATGGAAAGCTCTGATTCTTCCAGATCTTGACATTGAAAATATATTCCATAAGCTTCACGATGACCCTGAAACCATTCAAAAGGCTTCTAGTGACTATGGTCATATCGTGCATGAACTCCCAGCAGCTGTGTTTCATCCATCTTCCATAGACGACATAGCCACCTTGATAAAATCCTCATACAATAGCTTTGCCCCTTTTCACATAGCTGCAAGGGGCCAAGGCCACTCCCATCATGGACAAGCCATGGCTCGTGATGGGGTAGTGGTTGACATGGCCACCCTGAGAAAACAAAGAAATGGGGTTTCGATTAGTGTCTCTAAGGACCCTTTGATAGGTCACTATGCTGATGTTGGAGGGGAACAACTCTGGATTGATGTGCTACATGCCTCACTAGAACATGGACTTGCACCCGTTTCTTGGACTGATTATTTGTACTTGACCGTGGGAGGAACACTTTCCAACGCTGGAATTAGTGGCCAGTCTTTCCGCTATGGACCTCAAATCAGCAACGTTCATGAAATGGATGTTATCACTGGAAAAGGAGAGTTCGTAACCTGCTCTACGCAGAAGAACTTGGAGTTATTCAACGCGGTTCTTGGAGGCTTTGGACAATTTGGAGTCATAGCAAGGGCGAGAATTGCTCTTGAGGCAGCACCCAAAAGGGTTAAGTGGGTCAGACTACTTTATAGTGACTTTTCTGCTTTTACTAAAGACCAGGAACGATTAATCTCAATCAATGGAAGGAAACAAAAGAATGCATTGGATTTTTTGGAAGGGATGCTGCTAATGAACCAAGGCCCCATAAATAATTGGAGATCCTCTTTCTTCCCTCAATCTGACCATCCCAGAATAGCTTCTTTAATAACTGAACATAGCATCCTCTACTGTCTTGAAGTGGCTAAATATTATGACGACCTAACCGAGAAAAATGTGGACAAGGAAATGCATGTGTTGCTCCAAGGGCTGGCCTATATCCCCGGATTTTATTATGAGAAAAATGTCTCATACGTTGAGTTCTTGAATAGAGTCCGAAGTGGAGAGTTGAAGCTTCAGTCACAAGGACTGTGGGAGGTTCCTCACCCATGGCTTAATTTGTTTTTACCAAAATCTCAAATCTTGGATTTTAATTCAGGAGTATTCAAAGATATAATTCTTAAAAGAAACATCTCCTCTGGACCAGTCTTGGTTTACCCTATGAATAGAAACAAGTGGGACGATAGGATGTCAGCGTCAATACCAGACGAGGATGTCTTCTACACAGTTGGATTTTTGCACTCAAGTGGGTTTGATTCTTGGAAGGCATATGATGCTCAAAACAGAGAAATTTTGGAGTTCTGTAGGGATGCTGGCATTAAGGTTAAGCAATATCTTCCTAACCACAGCACACAGGAAGATTGGACAAACCATTTCGGTACCAAATGGATGAAATTCTTAGAAAGAAAACACCAGTTTGATCCAAGAATGATTCTATCACCCGGGCAAAAAATCTTCCACAAACAATTACAACCAGCGTTTTAA 1608 0.4223 MALNYPSSTYFILLVVTITRLIYTVGKTEQWKALILPDLDIENIFHKLHDDPETIQKASSDYGHIVHELPAAVFHPSSIDDIATLIKSSYNSFAPFHIAARGQGHSHHGQAMARDGVVVDMATLRKQRNGVSISVSKDPLIGHYADVGGEQLWIDVLHASLEHGLAPVSWTDYLYLTVGGTLSNAGISGQSFRYGPQISNVHEMDVITGKGEFVTCSTQKNLELFNAVLGGFGQFGVIARARIALEAAPKRVKWVRLLYSDFSAFTKDQERLISINGRKQKNALDFLEGMLLMNQGPINNWRSSFFPQSDHPRIASLITEHSILYCLEVAKYYDDLTEKNVDKEMHVLLQGLAYIPGFYYEKNVSYVEFLNRVRSGELKLQSQGLWEVPHPWLNLFLPKSQILDFNSGVFKDIILKRNISSGPVLVYPMNRNKWDDRMSASIPDEDVFYTVGFLHSSGFDSWKAYDAQNREILEFCRDAGIKVKQYLPNHSTQEDWTNHFGTKWMKFLERKHQFDPRMILSPGQKIFHKQLQPAF 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01889 535 Gene3D - 121 250 IPR016169 -
Phco8g01889 535 PANTHER GULONOLACTONE OXIDASE 28 528 - -
Phco8g01889 535 FunFam Cytokinin dehydrogenase 2 251 486 - -
Phco8g01889 535 SUPERFAMILY FAD-binding/transporter-associated domain-like 48 245 IPR036318 GO:0050660
Phco8g01889 535 Gene3D - 251 486 IPR016170 -
Phco8g01889 535 Gene3D - 51 527 IPR016167 -
Phco8g01889 535 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 70 105 IPR006093 GO:0016491
Phco8g01889 535 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 249 527 IPR015345 GO:0009690|GO:0019139|GO:0050660
Phco8g01889 535 SUPERFAMILY FAD-linked oxidases, C-terminal domain 249 527 IPR016164 GO:0003824|GO:0050660
Phco8g01889 535 Pfam FAD binding domain 70 217 IPR006094 GO:0050660
Phco8g01889 535 ProSiteProfiles PCMH-type FAD-binding domain profile. 66 248 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01889 Phco-Chr8 19946672 19950161 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01889 8 19946672 19950161 Phco8g01889 8 19946672 19950161 ECH
Phco8g01889 8 19946672 19950161 Phco7g02733 7 46337637 46340909 PCT