Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01884 ATGGCGGTGAAGAAAGCACGAATTGTGATAATTGGAGCAGGAATGGCGGGCCTCACTGCTGCCAACAAGCTTCACAGTAGTGTCTCAAAGAGCTTGTTTGAGGTGTGTGTTGTGGAAGGTGGAAACAGGATTGGTGGGAGAATCAACACTTCAGAGTTTGGTGGTGACCGGATTGAGATGGGTGCTACTTGGATCCATGGAATTGAAGGAAGTCCAATTCACAAAATAGCCCAACAAATCCATGCACTTGAGTCTGACCAGCCTTGGGAGTGCATGGATGGGAATGAAAATAAGACCACCACCATTGCTGAAGGTGGCTTTGTGCTAAGCCCTTCCTTTGTTCACCCCATCACCAAGCTTTTCAACAATCTCATGGACCATGCTCAGGGAAAGATGTCAACAGCAACAACAACAACCAAGGGTGACAGCGGAAACCTCAGTGTTGGCTCTTTTCTCAGACAAGGCCTTGATGCTTATTGGGGTTCATCCAAAGAGGAAAAGGAGCTCAAAGGTTTCGGAAAGTGGAGTAGGAAGTTGCTTGATGAAGCAATCTTTGCCATGCACGAGAACACACAGAGGACTTGTACATCTGTTGCTGACTTATTGACTTTGGATTATGGCGCAGAAAGTGAATACCAGATGTTTCCAGGTGAAGAAATCACAATTGCTAAAGGCTACTCAAGCATAATTGAATCGTTAGCATCTGTGTTACCACCTGGTTTAGTTCAGTTGGGTAGAAAAGTCACAAGAATTGAGTGGCAACCCGAGAGACACGAGGCGATGAATATGGAAAATGGAACATGTTCTAGGCCCGTGGTGCTACATTTCTCTGATGGCTCTATTATGTCTGCGGATCATGTCATTGTCACGGTCTCACTGGGAGTGCTGAAGGCCTCTATTCGTGATGATGATTCAGGTATGTCAATGTTCCATCCCCCTCTACCCTCTTTTAAGGCTGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTCATGCAATTGAGTCCTCCTCATGGAAGAAGAGACGAACACTCCAGTGTGTTCCCCTTCTTGCAAATGGTTTTCCATTCACATCAATCTGAGTTGAAGCACAAGAAAATACCCTGGTGGATGAGGAGGACTGCTACTCTTTGTCCTATCTACAACAATTCTAGTGTCCTCTTATCTTGGTTTGCTGGGGAAGAAGCTCTGGCACTTGAGTCACTCAAAGATGAAGAGATCAGTAAAGGGGTTTCAGACACAATTTCATGCTTCCTGTCACGTTCAGTTGAGTTTTGCAACGGGAATGTGCAATCTGAAAAGTACTCCCACGAATATAAGGTTAAATTCAGTAAAGTATTGAAGAGCCAATGGGGAACAGATCCTTTATTTCTAGGGTCATACAGTCATGTGGCAGTTGGATCAAGTGGAGATGATTTTGATACAATGGCAGAACCTTTGCCAAAATGTAGCAGCAGCCACCCTTCTGCTTCACCACCACTTCAAATCTTGTTTGCAGGGGAAGCAACCCACAGAACCCATTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCCAATAGGCTTCTTCAACATTATTCACCCTGTTAA 1608 0.4484 MAVKKARIVIIGAGMAGLTAANKLHSSVSKSLFEVCVVEGGNRIGGRINTSEFGGDRIEMGATWIHGIEGSPIHKIAQQIHALESDQPWECMDGNENKTTTIAEGGFVLSPSFVHPITKLFNNLMDHAQGKMSTATTTTKGDSGNLSVGSFLRQGLDAYWGSSKEEKELKGFGKWSRKLLDEAIFAMHENTQRTCTSVADLLTLDYGAESEYQMFPGEEITIAKGYSSIIESLASVLPPGLVQLGRKVTRIEWQPERHEAMNMENGTCSRPVVLHFSDGSIMSADHVIVTVSLGVLKASIRDDDSGMSMFHPPLPSFKAEAISRLGFGVVNKLFMQLSPPHGRRDEHSSVFPFLQMVFHSHQSELKHKKIPWWMRRTATLCPIYNNSSVLLSWFAGEEALALESLKDEEISKGVSDTISCFLSRSVEFCNGNVQSEKYSHEYKVKFSKVLKSQWGTDPLFLGSYSHVAVGSSGDDFDTMAEPLPKCSSSHPSASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYSPC 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01884 535 SUPERFAMILY FAD/NAD(P)-binding domain 1 532 IPR036188 -
Phco8g01884 535 FunFam Putative polyamine oxidase 5 isoform A 473 527 - -
Phco8g01884 535 Gene3D - 93 472 - -
Phco8g01884 535 Pfam Flavin containing amine oxidoreductase 15 529 IPR002937 GO:0016491
Phco8g01884 535 Gene3D - 8 527 IPR036188 -
Phco8g01884 535 PANTHER FLAVIN MONOAMINE OXIDASE 7 533 - -
Phco8g01884 535 SUPERFAMILY FAD-linked reductases, C-terminal domain 326 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01884 Phco-Chr8 19871148 19872755 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01884 8 19871148 19872755 Phco8g01884 8 19871148 19872755 ECH
Phco8g01884 8 19871148 19872755 Phco7g02740 7 46403529 46405244 PCT