Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01580 ATGAAATTCGGAAAGAGCCTCAGCAGCCAGATCGAGAAAACCCTGCCGGAGTGGCGCGACAAGTTCCTCTCCTACAAGGAACTCAAGAAGAAGCTCAAACAATTCGACCCTCCCGCTGCCGCCGATTACCGCCCCGGAAAACGCCTCAAGCCTGATGCCGCCGCCGCCACTGCCACCGACATGTCCAAGGAGGAGACCGACTTCCGCAACTTGCTTGAAAATGAACTCGACAAATTCAACACCTTCTTCGTAGAGAAGGAGGAAGAGTACATTATCAGACTCAAGGAGTTACAAGATAGGGTGGCCAAAGTTAAGGATTATAGTGAAGAGATGATGAAAATCCGCAAGGAAATTGTGGATTTCCACGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTTAACTATACAGGGCTCGTGAAAATACTGAAGAAGTATGACAAGAGAACTGGTGCTCTCATTCGCTTACCCTTCATTCAGAAGGTCTTGCAACAACCTTTCTTTACCACTGAATTGCTGTACAAGCTTGTAAAGGAGTGTGAAACAATGTTGGACCGTCTTTTCCCTGAGAATGATCCTCCTCCAGTTTCTGGTGATACAACTCCCCAAGCTGAAGGTTGTGATCCTTCAACTTCAACCACTACCAAGAGTGATGGTGGTTTGCTGATTCCCAAGGAATTAGCTGAGATTGAGTACATGGAGAGCCTTTATATGAAGAGTACAGTATCAGCTTTGCATGTTTTGCAGGAAATTAGAAGTGGAAGCTCAACTGTTAGCATGTTTTCATTGCCACCGCTGAAGATGAGTGGTTCAGAAGAAACATGGAAGAAAATCCCGGTTCTCGAACAAGCAGCCAAATCAGATTCCCTAGAACCCTGTATCCCCCGTCTAGTTTTTCTACTTGGCAATAGTAGATCACGCTCCAAGCTGCAATCAGAAGGTGGCGTTATAGAAAAGCTTAATGGTGGTAATGGTAGGATTAATGGTAGTTTCAAGATGGTATCGTGGTAG 1011 0.459 MKFGKSLSSQIEKTLPEWRDKFLSYKELKKKLKQFDPPAAADYRPGKRLKPDAAAATATDMSKEETDFRNLLENELDKFNTFFVEKEEEYIIRLKELQDRVAKVKDYSEEMMKIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTELLYKLVKECETMLDRLFPENDPPPVSGDTTPQAEGCDPSTSTTTKSDGGLLIPKELAEIEYMESLYMKSTVSALHVLQEIRSGSSTVSMFSLPPLKMSGSEETWKKIPVLEQAAKSDSLEPCIPRLVFLLGNSRSRSKLQSEGGVIEKLNGGNGRINGSFKMVSW 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01580 336 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 273 IPR031142 GO:0016036
Phco8g01580 336 MobiDBLite consensus disorder prediction 36 60 - -
Phco8g01580 336 MobiDBLite consensus disorder prediction 188 219 - -
Phco8g01580 336 Pfam SPX domain 1 35 IPR004331 -
Phco8g01580 336 Pfam SPX domain 112 162 IPR004331 -
Phco8g01580 336 ProSiteProfiles SPX domain profile. 1 160 IPR004331 -
Phco8g01580 336 MobiDBLite consensus disorder prediction 203 219 - -
Phco8g01580 336 CDD SPX_AtSPX1_like 2 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01580 Phco-Chr8 16183096 16185826 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01580 8 16183096 16185826 Phco8g01580 8 16183096 16185826 ECH
Phco8g01580 8 16183096 16185826 Phco7g02356 7 41271110 41273977 PCT