Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01573 ATGAGAAAAACCCCAGCAAAGGTTGGCACTTGGGCCATTTGTACCTGTAAACGTTGTTTATCTATGGAGACCAACAAACAGCAGAGGAAGAAATGGTTCCTGCCACTTGTATTGTCTCTACTGTTGTTAACCTTGCTCATACTCTTTTCCATCTTCGTCTCCTCCGATTCTTCCTCTTTGCTCTACCTATATCATACACGTGGCAGAGTGGAAGAGCCTCGTTTCGTGGAGTCAAAGCTGAGGGTGTCTTCCATCTCATCCAGTGATTCCGTTCCCAGGATCGCGTACCTGATCTCGGGGTCAGTGGGTGATGGCGAGACTCTGAAGAGGACCCTGAAGGCCCTTTACCATCCTAGGAACCAGTACGCTGTGCACTTGGACCTAGAGGCTTCCACGCAGGAAAGATTGGAACTTGCCAACTTCGTTAAGAACGAGCCTCTCTTTGCCAAATTGGGCAATGTTAGGATGGTTGTTAAGGCTAACTTGGTCACCTACAGGGGACCCACTATGGTCACTAATACCCTTCACGCTGCGGCCATTTTGTTCAAGGAAGGTGGACTCTGGGATTGGTTCATCAATCTAAGCGCTTCTGATTACCCCTTGGTAACCCAAGATGATCTGCTTCATACACTGTCATCAACTCCGAGACACCTTAACTTTATTGAGCACACCAGTGATATTGGCTGGAAGGAAGATCAGAGAGCCAAGCCGGTTATAATTGATCCAGCTCTTTATAGTGTCAATAAATCTGATTTATTTTGGGTGACAGAGAAAAGAAATGTTCCCACAGCTTATAAGCTGTTTACAGGATCTGCTTGGATGATGCTCTCTCGCCAATTTGTTGAATATTTGTTATGGGGATGGGATAACTTGCCTAGAATAGTCTTGATGTATTATGCCAACTTTCTATCCTCCCCTGAAGGGTATTTTCACACAGTCATCTGCAATGCTGATGAGTTCCGGAACACTACTGTAAATCACGACCTCCACTTCATATCATGGGATAACCCTCCAAAACAACATCCACACTTCCTTACAATTAATAACTACGAGGAAATGGTGGGGAGCAACGCGCCATTTGCTCGGAAGTTTGGCAGGAATGAACAACTCTTGGATAAGATTGATACTGAACTCTTGGGACGAAATGAACATGGTTATGTGCCTGGCAAGTGGTTTGACCGAGCAAATTCAAACATCACCAAACCATATTCTGCCATAAAAAATATCACTGAACTTAAGCCTGGCCCTGGAGCAGAAAGGCTCAAACGCCTTATCAATGGTTTATTGTCAGCAGAAGATTTTCACACTAAGCAGTGTTCTTGA 1323 0.449 MRKTPAKVGTWAICTCKRCLSMETNKQQRKKWFLPLVLSLLLLTLLILFSIFVSSDSSSLLYLYHTRGRVEEPRFVESKLRVSSISSSDSVPRIAYLISGSVGDGETLKRTLKALYHPRNQYAVHLDLEASTQERLELANFVKNEPLFAKLGNVRMVVKANLVTYRGPTMVTNTLHAAAILFKEGGLWDWFINLSASDYPLVTQDDLLHTLSSTPRHLNFIEHTSDIGWKEDQRAKPVIIDPALYSVNKSDLFWVTEKRNVPTAYKLFTGSAWMMLSRQFVEYLLWGWDNLPRIVLMYYANFLSSPEGYFHTVICNADEFRNTTVNHDLHFISWDNPPKQHPHFLTINNYEEMVGSNAPFARKFGRNEQLLDKIDTELLGRNEHGYVPGKWFDRANSNITKPYSAIKNITELKPGPGAERLKRLINGLLSAEDFHTKQCS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01573 440 PANTHER GLYCOSYLTRANSFERASE 29 439 IPR044610 GO:0015020
Phco8g01573 440 Pfam Core-2/I-Branching enzyme 94 353 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01573 Phco-Chr8 16146284 16149519 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01573 8 16146284 16149519 Phco8g01573 8 16146284 16149519 ECH
Phco7g02362 7 41350957 41353943 Phco8g01573 8 16146284 16149519 PCT