Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01497 ATGGGTAGTGGAGCTCTTGAAACGAATCGTTTAACAAATGGGGAAGCTGAGAATAGTCTTCACAAACAGGTTTCTCCTGCTGCACTCGACAACTCGCTTTCTGATGCCAGTAATGCAGTCACTGACCCTGATGTTCCTGCTAAGAGGGCCAGGCTGCAGAAGGAATTGACCTTCCAGGATATGTATCAAAATGATGGCGTGTTTGACGAGGATGAGGAGGATGACAGTGATTGGGAGCCGTTTCAGTTACACAAGTGTGTGGAATTTGAAATCAAAAAGTGGTGCTGCAGAAATTGTACTATGACCAACTTGGATTGCAATGACTGTTGCTATATATGTGGGGAGCACAGGGAGTCTAAAATCCTCAGCCATGGGTTTTTTGCATCTCCTTTAGCTCAAGACGAGGATCTGATTGAAGTCCATGGAGATGTAAAAGGACTGAAAGATGTTGGCTCACAGGAATCAGTGGCAAATAGTTCTACGGCGATTGGCTTTGATGAGAGAATGTTGTTGCATGCAGAAGTTGAAAAGAAATCACCTCCACATCCTGAGAGGCCAGATCGTCTTCAAGCCATTGCTGCTAGTCTTGCTAGAGCTGGCATATTTCCTGGAAAATGCTATTCAATTCCTTCTAGGGAAATCACACCAGAAGAACTTGTTACGGTTCATTCTTTGGAGCATATTGAGTCTGTGGAGGTTACAACTGAATCACTCTCTAGTTATTTCACTCCAGACACATATGCCAATCAGCATTCAGCACTTGCTGCTAGGTTGGCTGCTGGGTTATGTGCTGATCTGGCATCAGCAATTGTTTCCGGACGTGCCAAAAATGGATTTGCTTTGGTTAGGCCCCCTGGCCATCATGCTGGTGTAAGACAGGCAATGGGGTTCTGCCTTCACAATAATGCTGCTGTGGCAGCATTGGCTGCTCAAGCTGCAGGGGCTAGGAAGGTGCTAATTTTAGATTGGGATGTTCATCATGGAAATGGAACACAAGAAATATTTGAACAGAACAAATCGGTCTTGTATATATCATTGCATAGACATGAGGGCGGAAAGTTTTATCCTGGTACTGGAGCTGCTGAAGAGGTAGGTAGTATGGGCGCTGAAGGGTACTGTGTAAATATTCCATGGAGCCGAGGAGGAGTTGGTGACAATGACTACAATTTTGCATTTCAGCATGTTGTCCTTCCTATAGCTTCTGAGTTTAATCCAGATTTTACCATTGTATCTGCTGGATTTGATGCTGCAAGAGGTGATCCCCTAGGATGTTGCGATATTACTCCCTCTGGCTATGCACACATGACGCATATGTTGAATGGCCTCTCTGGTGGAAAATTGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGATCTATATCATCTTCTGCAACTGCAGTAATCAAGGTATTACTGGGTGAGAATCCTGGATGTGAACTGGAAAATAGTTTCCCTTCCAAAGCTGGCCTGGTAACCGTTCTGGAAGTCCTCAAAATTCAGATGAAGTTTTGGCCTTCCTTAAGTCCGATTTTTGTGAATTTGGAGTCACAATGGCGGATGTACTGTTTCGAAAAAAAAAGAAAACAGATTAAGAAACGACGCCGACTTCTGGTTCCAATGTGGTGGAGGTGGGGACGAAAAAGTTCGTTGTTCTATTTTATGAACGGCCATCTTCATGAAAAATCAAAGTGA 1692 0.4409 MGSGALETNRLTNGEAENSLHKQVSPAALDNSLSDASNAVTDPDVPAKRARLQKELTFQDMYQNDGVFDEDEEDDSDWEPFQLHKCVEFEIKKWCCRNCTMTNLDCNDCCYICGEHRESKILSHGFFASPLAQDEDLIEVHGDVKGLKDVGSQESVANSSTAIGFDERMLLHAEVEKKSPPHPERPDRLQAIAASLARAGIFPGKCYSIPSREITPEELVTVHSLEHIESVEVTTESLSSYFTPDTYANQHSALAARLAAGLCADLASAIVSGRAKNGFALVRPPGHHAGVRQAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGKFYPGTGAAEEVGSMGAEGYCVNIPWSRGGVGDNDYNFAFQHVVLPIASEFNPDFTIVSAGFDAARGDPLGCCDITPSGYAHMTHMLNGLSGGKLLVILEGGYNLRSISSSATAVIKVLLGENPGCELENSFPSKAGLVTVLEVLKIQMKFWPSLSPIFVNLESQWRMYCFEKKRKQIKKRRRLLVPMWWRWGRKSSLFYFMNGHLHEKSK 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01497 563 FunFam Histone deacetylase 15 154 527 - -
Phco8g01497 563 ProSitePatterns Zinc finger RanBP2-type signature. 94 113 IPR001876 -
Phco8g01497 563 MobiDBLite consensus disorder prediction 1 39 - -
Phco8g01497 563 MobiDBLite consensus disorder prediction 1 46 - -
Phco8g01497 563 Gene3D Histone deacetylase domain 158 510 IPR037138 -
Phco8g01497 563 PRINTS Histone deacetylase superfamily signature 405 415 IPR000286 -
Phco8g01497 563 PRINTS Histone deacetylase superfamily signature 317 332 IPR000286 -
Phco8g01497 563 PRINTS Histone deacetylase superfamily signature 284 307 IPR000286 -
Phco8g01497 563 SUPERFAMILY Arginase/deacetylase 158 497 IPR023696 -
Phco8g01497 563 PANTHER HISTONE DEACETYLASE 9-RELATED 130 509 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Phco8g01497 563 Pfam Histone deacetylase domain 182 470 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01497 Phco-Chr8 15398622 15406644 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01497 8 15398622 15406644 Phco8g01497 8 15398622 15406644 ECH