Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01491 ATGAGTCGTTTGCGTATTGACGGGGACACCGTTGTCACGCTACTACTGCTCTATCTCTCTATAAATACAGCACCACTTCAGCTATCACGGAGGGAGACACATTGGAAGAGAGAGAAAGATACCCTGATTCGAATTCGATTTTCATTTCTCACTCTCTCTCTTTCCCCTATGGCGAAACCTCGCAAGCCCAAGAACAACGAAGACCCCAAGCCCGAAAACTCTGGTGCCCTAGTTCACCACCAAAAACTATGCCTCTCAATCGACATCGACAAACGCCTAGTCCACGGGTACACTGAATTGGAGATTGCGGTGCCGGAGATTGGGATTGTAGGGTTGCACGCGGAGAATTTAGGGATTGAGAGTGTTTGGGTCGATGGTGAGCCCACGGAGTTCGAGTATTACCCGCATCAGCAGCAGCAGGTGGGAGATGATAAGAGGTTTAGTTCTGTGTGTTCTCCTAGCTCTGCTGCCGATGCTGCTGTCTCAGTGTACATGTCCTCTCTGGAGAAGGAACTGGTGCCCAATTTACTCATCAACTGCTGTAAACCTACCAAGGCTGAAAGTGAACAGCAGCCGGAGCAACCAGTTCCCGAGAACGGGTTTCACTCCTCGGCCGAGCCCAAACAGAATGTGAGAATTGTTCGTATTGACTATTGGATAGAAAAGGCAGAGACTGGAATCCACTTCAGAAATAATCTTCTTCATACTGATAATCAGATAAGGAGAGCAAGATGTTGGTTCCCCTGTATAGATGACAATTCACAACGATGCTGCTATGACCTGGAGTTCACCGTATCACACAATCTTGTGGCTGTTAGTACGGGATTCTTGCTTTATCAGGTCTTAAGCAAGGACAATCCTCCTCGGAAAACATATGTCTATAAATTGGATGTTCCAGTTGCTGCAAGGTGGATATCTTTGGCTGTTGCCCCATTTGAAATTCTTCCTGATCACCAATTTAGTCTCATATCACACATGTGTTTGATGCCAAATCTATCAAAAATGCGGAATACAGTGGAATTTTTCCATAGTGCCTTCAGCTGCTATAAGGATTATCTTTCTGTAGACTTCCCATTTGACTCATATACGCAAGTTTTCATAGAGCCAGAGATGGCTGTGTCTTCAATGAGTTTAGGAGCCTCTATGAGTATATTTAGTTCACAAGTTTTGTTTGATGACAAGGTTATTGACCAGACTATTGACACAAGGGTAAAACTTGCATATGCTCTTGCAAGACAGTGGTTTGGGGTGTATATCACTCCTGAGGCACCAAATGATGAGTGGCTCTTAGATGGACTTGCTGGCTTCTTGACAGATTTTTATATCAAGAAACATTTGGGAAATAATGAGGCACGGTACCGGAGATACAAGGCAAATTGTGCTGTTTGCAAAGTTGATAATGGTGGAGCGACAGCTTTGAGCTGTTCAGCTTCCTGCAAAGATTTATATGGAACTCAGTGTATTGGGTTGTATGGAAAAATAAGATCATGGAAGTCTGTGGCTGTTCTTCAGATGTTGGAAAAGCAAATGGGTCCTGAATCTTTCCGTAGAATTTTACAAACAATAGTTTCACGGGCTCAAGATAAAACGCGTTCCATGAAGACTCTAAGTACTAAGGAGTTTCGACATTTTGCCAATAAGGTTGGGAATCTTGAACGTCCATTTCTTAAGGATTTCTTTCCACGGTGGGTTGGTTCTTGTGGATGTCCTGTTCTAAGGATGGGGTTTTCCTATAACAAAAGGAAGAATATGGTTGAATTGGCTGTGTTGCGAGGATGTACAGCATTGCAGACTTCAACTACATCCAGTCTTGATATTAATCCTGATACAGAAAATCGAGATGGAGATACTGGATGGCCTGGTATGATGAGCATCAGGGTATATGAACTTGATGGTATGTATGACCATCCAATTCTGCCAATGGCTGGAGAAGCATGGCAACTATTGGAAATACAATGCCACTCAAAGCTTGCTGCTAGACGCTTTCAGAAGCCCAAGAAAGGATTAAAACATGATGGATCTGATGATAATGGTGACGTGCCTTCCATGGACGTGCGGTCAAATACTGAGTCGCCTTTATTATGGATCAGAGCAGATCCTGATATGGAGTACCTTGCTGAGGTTCATTTTAATCAACCAGTTCAGATGTGGATCAATCAATTAGAGAAGGACAAAGATGTTATTGCCCAGGCACAAGCAATTGCAGCCCTTGAGGCATCACCACAACTATCATTTTCAATTGTAAATGCCCTGAACAATTTTCTCAGTGACTCCAAGGCCTTTTGGAGAGTACGGATTGAAGCGGCATTTGCATTGGCAAATTCAGCATCTGAGGAAACTGATTTTTCTGGTCTACTTCATTTGGTGAAATTTTACAAGAGTAGGAGGTTTGATCCTGACATTGGACTCCCAAAGCCAAATGATTTTCACGATTTTGCTGAGTATTTTGTTCTTGAGGCTATTCCACATGCTGTTGCCATGGTTAGGGCCGCTGACAGGAAAAGCCCAAGGGAGGCTATTGAGTTTGTTCTACAGCTATTGAAGTACAACGACAACAATGGGAACCCCTACTCAGATGTCTTCTGGCTTTCTTCATTAGTCCAATCAGTTGGTGAGCTTGAGTTTGGGCAACAGAGTATTCTTCTGTTGTCATCACTTCTCAAACGCATTGACCGGCTTCTACAATTTGATAGCCTCATGCCAATATACAATGGAATCTTGACTATCAATTGTATCCGAACATTGACCCAGATTGCTTTAAAGCTTTCGGGGTTCATTCCTCTTGATCGAGTTTATGAACTTGTAAAGCCTTTTCGTGACTTGAAGACACTGTGGCAAGTTCGAATTGAAGCAAGTAGAGCACTCCTTGATCTTGAATTCCACTGCAAGGGCATGGATTCAGCATTGCTTTTATTTATCAAGTACTTAGAGGAGGAGCATTCCTTAAGAGGGCAGTTAAAGCTAGCCACCCATGTTATGAGGCTATGTCAGATGAGGGATGGATTGAATTCAGATGAGGAAATTACAAGCCAAACTCTTGTCTCTATGCTTAATTTACTGGAAGGGCGTACTGCATTTAATAATGTCTTTCTCCGGCATTATCTGTTCTGCATACTACAAATACTTGCTAGAAGACCACCAACTCTTCATGGGATTCCCCGGGAAAATAGAACGTTGAATATGAGTCTTACAGAAGCTTGTAACTATCAGAAGAACATTTTTGTTCTTGATTCGGATAGTAAACCTTTGGATCTGCCAGGCTCTACCCAAAACCCTACACCAAATCTTGGCCTGGAAGGTTTGAGCGATGCACTTTACGAAGCTTCTAAGGACCAACGTACTGAAGCTCCAACGCAGGTGCACATTGAAGCTCTTCTAAAGGAAGCGACCCTAGAGAAACCTGAAGAGGGATTTACTGAAATTCCACAGGAAGCACCAGTGGAAGCACCAATGGAAGCTCCAAATGAAGTTTCCAAGGAAGCAGATACTGTATCGAATAGCCATGAAAGAAAGAGGCTCATTAAAATAAAGGTCAAACAATCTTCTGCCACCAGTAGGGCTGATACTGATAATCAAGTGGTTGAACGTTCTCTCGGTGGTCGTAATGAAATGGATCATGGAGCTAGCAGTTCAGTGTCTGTAGATGCACCCCAGAGGAATTTTGCCGAGACTCTTAGCATCAGTAATCACAATATAGAAGAAGTTAATTCTTGGCATGATCGTGGTTCGCGCATGACTGCTAGCATTGGTAGTGCTAAATTTTTGAGTGACGGTGATGAATTGGTCAAAGAACTCCAGTGCACTGCTGATTCAAGTATAGTTTATTCACAACCTCAGCCTGAAGATCCGTCATCGTCCAGTATTATCCAGGATAACAATGTAGATGCGGATGCACGACGATATGCCAGCCTTCAAACTCTTTCAGTTGCAAGATTTGATCCTGATGGAGAATCGTTAGGTAAAGAAATTTCTGCTCGTGGCAAGGAAAAGCACAAAAGCAAGGAAAAGAAACGAAAACGGGAAAGTAATAAAGGCCATGATGATCCAGAATATTTGGAGCGAAAAAGATTAAAGAAGGAGAAAAAACGACGGGAAAAAGAAATGGCAAAACTTCAGAATGATGAAGCGAAGAGATCCTCTGTAGATTTGTCAAGTAAGAAAGAGGAACCTGTAGTGGACGTTGCTAGAGAGGTTAAATCTGTTGAGCCCAGCGGATATAATTCTAAATTAGAAACCAAAAAGATTGGTATCAAACCGGATCCATCTGAAGGCACATCTACTGGTCCAAAAATTCGAATTAAAATTAAAAACCGAATGCTCAACAAGTGA 4329 0.4269 MSRLRIDGDTVVTLLLLYLSINTAPLQLSRRETHWKREKDTLIRIRFSFLTLSLSPMAKPRKPKNNEDPKPENSGALVHHQKLCLSIDIDKRLVHGYTELEIAVPEIGIVGLHAENLGIESVWVDGEPTEFEYYPHQQQQVGDDKRFSSVCSPSSAADAAVSVYMSSLEKELVPNLLINCCKPTKAESEQQPEQPVPENGFHSSAEPKQNVRIVRIDYWIEKAETGIHFRNNLLHTDNQIRRARCWFPCIDDNSQRCCYDLEFTVSHNLVAVSTGFLLYQVLSKDNPPRKTYVYKLDVPVAARWISLAVAPFEILPDHQFSLISHMCLMPNLSKMRNTVEFFHSAFSCYKDYLSVDFPFDSYTQVFIEPEMAVSSMSLGASMSIFSSQVLFDDKVIDQTIDTRVKLAYALARQWFGVYITPEAPNDEWLLDGLAGFLTDFYIKKHLGNNEARYRRYKANCAVCKVDNGGATALSCSASCKDLYGTQCIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSMKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTALQTSTTSSLDINPDTENRDGDTGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSKLAARRFQKPKKGLKHDGSDDNGDVPSMDVRSNTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADRKSPREAIEFVLQLLKYNDNNGNPYSDVFWLSSLVQSVGELEFGQQSILLLSSLLKRIDRLLQFDSLMPIYNGILTINCIRTLTQIALKLSGFIPLDRVYELVKPFRDLKTLWQVRIEASRALLDLEFHCKGMDSALLLFIKYLEEEHSLRGQLKLATHVMRLCQMRDGLNSDEEITSQTLVSMLNLLEGRTAFNNVFLRHYLFCILQILARRPPTLHGIPRENRTLNMSLTEACNYQKNIFVLDSDSKPLDLPGSTQNPTPNLGLEGLSDALYEASKDQRTEAPTQVHIEALLKEATLEKPEEGFTEIPQEAPVEAPMEAPNEVSKEADTVSNSHERKRLIKIKVKQSSATSRADTDNQVVERSLGGRNEMDHGASSSVSVDAPQRNFAETLSISNHNIEEVNSWHDRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNVDADARRYASLQTLSVARFDPDGESLGKEISARGKEKHKSKEKKRKRESNKGHDDPEYLERKRLKKEKKRREKEMAKLQNDEAKRSSVDLSSKKEEPVVDVAREVKSVEPSGYNSKLETKKIGIKPDPSEGTSTGPKIRIKIKNRMLNK 1442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01491 1442 MobiDBLite consensus disorder prediction 1340 1356 - -
Phco8g01491 1442 MobiDBLite consensus disorder prediction 1178 1196 - -
Phco8g01491 1442 MobiDBLite consensus disorder prediction 61 75 - -
Phco8g01491 1442 Gene3D Neutral Protease Domain 2 320 568 IPR027268 -
Phco8g01491 1442 Coils Coil 1352 1379 - -
Phco8g01491 1442 MobiDBLite consensus disorder prediction 1315 1329 - -
Phco8g01491 1442 Gene3D tricorn interacting facor f3 domain 76 309 IPR042097 -
Phco8g01491 1442 Pfam Peptidase family M1 domain 340 537 IPR014782 GO:0008237|GO:0008270
Phco8g01491 1442 MobiDBLite consensus disorder prediction 1364 1396 - -
Phco8g01491 1442 MobiDBLite consensus disorder prediction 664 686 - -
Phco8g01491 1442 FunFam Transcription initiation factor TFIID subunit 2 169 309 - -
Phco8g01491 1442 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 74 310 IPR042097 -
Phco8g01491 1442 SUPERFAMILY ARM repeat 500 1049 IPR016024 -
Phco8g01491 1442 CDD M1_like_TAF2 80 564 - -
Phco8g01491 1442 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 57 1363 IPR037813 GO:0005669
Phco8g01491 1442 MobiDBLite consensus disorder prediction 1145 1217 - -
Phco8g01491 1442 MobiDBLite consensus disorder prediction 1313 1396 - -
Phco8g01491 1442 MobiDBLite consensus disorder prediction 56 75 - -
Phco8g01491 1442 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 331 573 - -
Phco8g01491 1442 FunFam Transcription initiation factor TFIID subunit 317 568 - -
Phco8g01491 1442 MobiDBLite consensus disorder prediction 1410 1442 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01491 8 15311201 15333406 Phco8g01491 8 15311201 15333406 ECH