Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01486 ATGGATGTAACTCATGTCTCTCACAGCCTTGGCGATCCCAAAATTCGTCGAGTGGGTTTCTTTGTTCCCGAATCCTCCACCACCGACTCTTACAAGATTCTGTCGCCACGTCATCTTTCCGGGACGCTCCCGGATATGCAGACTTCCGTCGATGCCCAAGTGTCATCTCAGAGCTACGATGCCTCTGAAAACCTAAACCTTGAAACTGGCATTGAAAAGAGGGAAGAGGGAGAGAAAAAGGTTCTGAAATCGAGGTCAAAGCCGCTGAAAGAAAAAACTACCAAGGCAGAGAGACGAGCCTTGCAGGAAGCACAGAGAGCTGCTAAAGCTGTCACTTCTAAAGATGAGAGAAGTAAGGCTGTTGCTGAAACTGGTGGAGCTGCCACGGCTAAAAGTACAAAGCAGTCTTCTCGAAAGAAAGTTGGTCCTTCGTCTCCACCGGCTGCTGATAAAAAAGCAGGAGAGCGTCTTTTGGATAAAGACAGGAAAAAGGATGCTCCTCCTCCACGAATGCAATTTGATGATGAAAGCCGAATGGAAAAGGCTAGAAAGCGTGCAGTAGTCAATCCAACTGAATCTAGAACCAGAGTTGAATTATTTAAGCATTTGCCTCAACATGAACATGGGACTAAGCTTTCTAATCTTGAATCAAAGTTTTTCCACCTTGGTTTAGTGCACCCTTCTGTATTTGAGGTAGGACAGCGATATTCGGCAGGGGATATATGGGGGGGTAATGCTCGTTGTATAGCAATGCTAAGAGCACTTCAAGATGCCATTAGAGATTACTGCACAGATCATGAAAAGGCCCTTGTTAGGGATTTAACTTCAAAAATCAACAGTTATGTTTCATTCTTTACTGAATGCAGACCACTTTCTATGAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTCGTATTGTCAACCTGTCTACTAATCACTCCGAGTTTGAGGCAAAAAGAACCTTGTGTTCAGATATTGACCGGTTTATAAATGAAAAAATAATTCTTGCTGATAAGGTGATTGTCCGACATGCTTTTACAAAGATTAAGGATGGGGATGTGCTTCTCACATATGGATTGTCGTGTGTTGTTGAGATGATTCTTTTATATGCCCATGAACTTGGAAAACATTTCCGTGTTGTTGTGGTAGATTCCCAGCCAAGGCTTGAAGGTCAGGTCTTACTTCGTAGGCTAGTGGCTAAGGGTTTGAGTTGCACATATACTCATATCAATGCTGTTTCTTATATCATGCATGAGGTCACACGAGTTCTTCTGGGAGCTTCTGCAGTTTTGTCTAATGGAACTGTATATTCAAGGGTTGGGACTTCTTGTGTTGCAATGGTGGCTCATGCATTTCGTGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTAATGAAAGGGTGCTACTGGATTCAATATGTTCTAACGAACTAGGTGACCCAGATGCTATTGCCAGGGTTCCTGGACGAATGGATGTCAATTATCTAGATAATTGGGCAAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTCACGGTTATTGTAACAGATTATGGTATGCTTCCTCCTACAAGCGTGCCTGTAATAGTACGTGAATATCGACGAGAGCATTTGTTGATGTAG 1653 0.4253 MDVTHVSHSLGDPKIRRVGFFVPESSTTDSYKILSPRHLSGTLPDMQTSVDAQVSSQSYDASENLNLETGIEKREEGEKKVLKSRSKPLKEKTTKAERRALQEAQRAAKAVTSKDERSKAVAETGGAATAKSTKQSSRKKVGPSSPPAADKKAGERLLDKDRKKDAPPPRMQFDDESRMEKARKRAVVNPTESRTRVELFKHLPQHEHGTKLSNLESKFFHLGLVHPSVFEVGQRYSAGDIWGGNARCIAMLRALQDAIRDYCTDHEKALVRDLTSKINSYVSFFTECRPLSMSMGNAIRFVKSRIVNLSTNHSEFEAKRTLCSDIDRFINEKIILADKVIVRHAFTKIKDGDVLLTYGLSCVVEMILLYAHELGKHFRVVVVDSQPRLEGQVLLRRLVAKGLSCTYTHINAVSYIMHEVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHAFRVPVLICCEAYKFNERVLLDSICSNELGDPDAIARVPGRMDVNYLDNWASEDNLRLLNLMYDATPSDYVTVIVTDYGMLPPTSVPVIVREYRREHLLM 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01486 550 Pfam Initiation factor 2 subunit family 243 533 IPR000649 GO:0044237
Phco8g01486 550 MobiDBLite consensus disorder prediction 128 142 - -
Phco8g01486 550 Gene3D - 337 543 IPR042529 -
Phco8g01486 550 MobiDBLite consensus disorder prediction 50 190 - -
Phco8g01486 550 MobiDBLite consensus disorder prediction 152 190 - -
Phco8g01486 550 SUPERFAMILY NagB/RpiA/CoA transferase-like 225 543 IPR037171 -
Phco8g01486 550 MobiDBLite consensus disorder prediction 50 65 - -
Phco8g01486 550 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 61 547 - -
Phco8g01486 550 MobiDBLite consensus disorder prediction 67 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01486 Phco-Chr8 15251604 15255574 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01486 8 15251604 15255574 Phco8g01486 8 15251604 15255574 ECH