Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01477 ATGCTACAGAGAGTGGTGCGCTATTCCGCCCAACCATTCAATCCTCCAACTCGCACGACACCACCATCACTTTCGCCAATTCAATTAATACCCACTTCTCCATCTTTCCCAGTCCTTAAACAGCAATGCAGATTATCACGGAGAGAGCTCACAATCTTCAGCAACTCTTGCTTGCTTCTTCTCTGGGGTACTCAGGTGGTGAATGGATCCAGCGCAAGAGCAGAAGCAGCTGTTGCAAACACAAACAACAGTGATCAACCAGAAGAGAATGTGGTTTTTGCAGGAGAGGATGTTGCTAACACAAGCAGCAGTGCTCGACCAGAAGAGAATCGGGTTTTAGCAGAAGATGTTGCTAACACAAGTAACAGTAACCAACAAGAAGAAGATTTGAATTTAGCAGAAGAAAATGTTGCTAACACAAGCAACAGCGATCAAACAGAAGAGAATCTGACTAGCACTCCTAGCTGCACTGAAAGAAAAACTACCAAACAAGTATTCTTAGACATATCTATCGATGGTGAACCTGCTGGTCGCGTTACAATAGGGCTTTATGGAGACGAGGTCCCTGCAGGAGTTGACAGGTTCAGTAAGGTTGTAAGTGGAGCCGCTGGTATTAGCTACAGAAGAAAAGAGTTCGTTAAAATCATGCCTAATTATGTTCAACATGGCGGCCTTAGATCCTATGGGGTGGATGCTGAATTTTCTTCGAGGACAGGTAGCAACTTGGGAGCTAATAGTCTAGTTCAGGAATGGGAGAGGGAGTATGAGAAATGTCCTGGGACTAAAAACGTGACTGGAAGTGTAGGCATTATTGTGAGAAACCCGACAAAACCACCCCCAAAGATGAAGCTGGTTGCAAAGAAAGGGAAGCTTGAGATTGATCAAGAAGAAGTAGGTATTGATCCCAACGGTACAGAATTTGTCATAGTTACAAAGGACTCACCAGAATTGGATACATCGTCTCTGGTAATTGGAAGAGTGATAGGAGGCATGGAGGTTGTGCAGAGGATCGGTCAGGTTAAAACTGTACAGGAGAATACAGGATCTCCATATTTTAGGGTGGCAAAGCTGATTGGAGACAAGAGAGCTGTTGTAGCAGAAAGAGGATTCAACCGCCCTTATTCAAAGGTCATTGTTACAAACTGCGGTTTAATGCAGTAA 1161 0.4427 MLQRVVRYSAQPFNPPTRTTPPSLSPIQLIPTSPSFPVLKQQCRLSRRELTIFSNSCLLLLWGTQVVNGSSARAEAAVANTNNSDQPEENVVFAGEDVANTSSSARPEENRVLAEDVANTSNSNQQEEDLNLAEENVANTSNSDQTEENLTSTPSCTERKTTKQVFLDISIDGEPAGRVTIGLYGDEVPAGVDRFSKVVSGAAGISYRRKEFVKIMPNYVQHGGLRSYGVDAEFSSRTGSNLGANSLVQEWEREYEKCPGTKNVTGSVGIIVRNPTKPPPKMKLVAKKGKLEIDQEEVGIDPNGTEFVIVTKDSPELDTSSLVIGRVIGGMEVVQRIGQVKTVQENTGSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCGLMQ 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01477 386 Coils Coil 123 143 - -
Phco8g01477 386 SUPERFAMILY Cyclophilin-like 161 385 IPR029000 -
Phco8g01477 386 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 5 386 IPR044185 -
Phco8g01477 386 Gene3D - 153 386 IPR029000 -
Phco8g01477 386 FunFam Peptidyl-prolyl cis-trans isomerase B 155 386 - -
Phco8g01477 386 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 167 345 IPR002130 GO:0000413|GO:0003755
Phco8g01477 386 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 166 384 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01477 Phco-Chr8 15179374 15180678 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01477 8 15179374 15180678 Phco8g01477 8 15179374 15180678 ECH