Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01476 ATGGTGCAAGACTCTGAAAAGAGATTCCATTCCATCATGGACAAGCTCTTCCATCCTCCCAAGCCCCCCTCCTCATCCAGTTCATCTGGAGTGCAGTTATCAGGGAGTAAGAAACGTCCTTACCAGTCAGGGGTGATGGAGTTGAATCGGAGAGGGGATGTTGCTGAGGGACAGCAGTCCTCCTCGGCAGCGACCACGGCACTGCAGGGACCACTCTGCCGACCGTGGGATCGTGGTGATTTTATGAGAAGATTAGCTACATTCAAATCTATCTCATGGTTTGCTAAACCAAAGGTAGTGAGTGCAGTAAATTGTGCTAGTAGAGGTTGGATCAATGTGGATATTGACACTATAGCCTGTGAAGCATGTGGAGCACGTCTTCTTTTCTCTACACCAGCATCTTGGAATCAGCAACAGGTGGAGAAGGCAGCATTAGTATTTAGCTTAAAGTTGGGTAATGGACATAAATTACTTTGCCCATGGATTGATAATGCCTGCAATGAAACACTGGCACGATTTCCTCCTACAACTCCTGAGATATTAGTTGAAAATTTCAGAAAACACTGTTTTGCACTCTTGCAACTATCAGCTCTTCCACGAATTTCATCTTCAGCTATAGCCTACATTCAAAGCCAAAGCCCACTTCTGGAAGACTTTCTTGGACAATCTTTGCTGCTGGAGTATGGAAATGGATCTACTGAAAATTTTGGGATTGGGGATCTTAGTAGTCAGGAGGAACTGAAATTTTATTATCAGGCTCAAAAGCTTATAAGTTTATGCGGTTGGAAACTACGTCCTCTACCTTATGTAGTTGATTGTAAGGATATATCAGATCAGTCTCTCAAAAATTCAACTACTCTTGCAATTCATTCAGTTGGCACTGATGAAAATAAAATAGATGAAAACTCCATGGATTCTATTGGGGAACAAGTGGATCCAAATTCTTCTGTATTAGATTGCACCCTATGTGGAGCCACTATTGGATTGTGGGCATTCTGTACTGTTCCCCGGCCAGTGGAATCATTCAGACTAGTGGGATATGCTGAAGTGAATGGTGAAAATGCTTTTGTGGCCCACAATTTACTGAATAAAGATGATCTTGAAAATAGGCAGGGTGCCAGGCCTGATGTTGCAAATTCATCAAAGGATACTTCTTCAAGTCTAAATATGACAATTGCAGGGGGACCTCCCCCAACAAAGCAAAACTTTAAAGCAATAATATCTCTGCCTGTTATTGGTCAGAATTTAAGGGCTCGTCTTTCTTATGATTCTAATTTTAGGGATCATGCTTTTGTTAACAAAGGTGGTAATGAATCAAACTTACAGGAAAAAACTGACAATATCATTAATTCTTCTATTGGACAACTTGTTCCCGAGTCATCTGAACCCAGGGAGATTGCAGATTATGAAAATGGTTCTCAAGCAAGGATCTGTGATTCAGATGTTATTGTGGGCACCCATCATGAAGGACAATCATTTTGTCTTAAGGATAAGATGACTACACACACAGTTGCTGATAAATTGAATAGTTCAGCTGCAGGATATTGTGGTGGTTCTCAGAAAGACTCTACAGAAGGTGAAACACTTTCTGTTTTGCGTAAGACTTCGGATGGCAAAGTTGGTAGTGACAGAGAAGAGAATCCTATTGGTAGTGAAGATGTACATTCTAGTATAGAGAAGTTTAAGAACCCAGCACCTTCTGATAAAGCAACGGATTTTGATCCAATCCGGCAGCACAGACACTTCTGCCCCTGGATTGCATCAATAAATGATGGGGAACCTGGGTGGAAGCAAACATTATCTGCTCTGTATCATCAGAAAAATCCGTTGCCGCGTTCACCAAATAGATCCCCCTCATCTCTTCCTATTGTTAAGGTGGATGATCCTGTGGGTTCAATTAGAAAGCTTTTCATGTCTCCATCAACAAAGAGAATGAAGTCCACTCATAATATGGGGCAAAATACATAA 1968 0.4157 MVQDSEKRFHSIMDKLFHPPKPPSSSSSSGVQLSGSKKRPYQSGVMELNRRGDVAEGQQSSSAATTALQGPLCRPWDRGDFMRRLATFKSISWFAKPKVVSAVNCASRGWINVDIDTIACEACGARLLFSTPASWNQQQVEKAALVFSLKLGNGHKLLCPWIDNACNETLARFPPTTPEILVENFRKHCFALLQLSALPRISSSAIAYIQSQSPLLEDFLGQSLLLEYGNGSTENFGIGDLSSQEELKFYYQAQKLISLCGWKLRPLPYVVDCKDISDQSLKNSTTLAIHSVGTDENKIDENSMDSIGEQVDPNSSVLDCTLCGATIGLWAFCTVPRPVESFRLVGYAEVNGENAFVAHNLLNKDDLENRQGARPDVANSSKDTSSSLNMTIAGGPPPTKQNFKAIISLPVIGQNLRARLSYDSNFRDHAFVNKGGNESNLQEKTDNIINSSIGQLVPESSEPREIADYENGSQARICDSDVIVGTHHEGQSFCLKDKMTTHTVADKLNSSAAGYCGGSQKDSTEGETLSVLRKTSDGKVGSDREENPIGSEDVHSSIEKFKNPAPSDKATDFDPIRQHRHFCPWIASINDGEPGWKQTLSALYHQKNPLPRSPNRSPSSLPIVKVDDPVGSIRKLFMSPSTKRMKSTHNMGQNT 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01476 655 MobiDBLite consensus disorder prediction 512 531 - -
Phco8g01476 655 Pfam C3HC zinc finger-like 75 198 IPR012935 GO:0008270
Phco8g01476 655 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 648 - -
Phco8g01476 655 MobiDBLite consensus disorder prediction 1 15 - -
Phco8g01476 655 MobiDBLite consensus disorder prediction 374 396 - -
Phco8g01476 655 MobiDBLite consensus disorder prediction 537 559 - -
Phco8g01476 655 MobiDBLite consensus disorder prediction 21 39 - -
Phco8g01476 655 MobiDBLite consensus disorder prediction 1 44 - -
Phco8g01476 655 MobiDBLite consensus disorder prediction 369 396 - -
Phco8g01476 655 MobiDBLite consensus disorder prediction 607 626 - -
Phco8g01476 655 MobiDBLite consensus disorder prediction 512 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01476 Phco-Chr8 15173977 15178986 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01476 8 15173977 15178986 Phco8g01476 8 15173977 15178986 ECH