Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01474 ATGGCTATTCCCTTCAAAGCCTCATACCCACTTTTCCTTTGCTTGATTCTTTTCTGTGGTGTCAATTGCACTGAGTTTGAAGTTGGAGGCCATGATGGTTGGGTTGTCCCAAAGACAAACGATGATTCTCAAATGTACAATCAGTGGGCATCCCGAAACAGATTCAAGGTTGATGACACTCTTCTTTTCAAGTACGAGAAAGACTCAGTTATGGAGGTGACAGAAGAAGAATATGAAAATTGTAAATCCCCTCGTCCCCTCTTTTTCTCCAACAATGGTGACACTGTCTTCAAGTTTGACAGGCCAGGCTTGTTCTACTTCATTAGTGGGGTTCGTGGTCACTGTGACAGAGGGCAGAAGATGATCATCAAGGTCTTGGATATAGTGGATATAGAGGCAACACCCTCACCCCAATATGCAAATGACAGTGCACCAAAGCCACATAAAAAAAGTGGAGTTGCTGAACTGACTCCTATGAGGATAATAACAGCATCCACACTTTTTGTTATGTCAACCTTCTTGCTTCAGCTTTATGTTTGA 540 0.4259 MAIPFKASYPLFLCLILFCGVNCTEFEVGGHDGWVVPKTNDDSQMYNQWASRNRFKVDDTLLFKYEKDSVMEVTEEEYENCKSPRPLFFSNNGDTVFKFDRPGLFYFISGVRGHCDRGQKMIIKVLDIVDIEATPSPQYANDSAPKPHKKSGVAELTPMRIITASTLFVMSTFLLQLYV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01474 179 SUPERFAMILY Cupredoxins 23 126 IPR008972 -
Phco8g01474 179 Gene3D - 23 129 IPR008972 -
Phco8g01474 179 Pfam Plastocyanin-like domain 42 119 IPR003245 GO:0009055
Phco8g01474 179 ProSiteProfiles Phytocyanin domain profile. 24 127 IPR003245 GO:0009055
Phco8g01474 179 PANTHER BLUE COPPER PROTEIN 24 144 IPR039391 GO:0009055
Phco8g01474 179 CDD OsENODL1_like 24 126 IPR041846 -
Phco8g01474 179 FunFam Early nodulin-like protein 1 23 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01474 Phco-Chr8 15158894 15159772 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01474 8 15158894 15159772 Phco8g01474 8 15158894 15159772 ECH