Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01444 ATGGCAGACGTAACCACCTACCCCCGCCACCACCTCCACCCAGACGATGACCAAAACCTGATTCCTTTCCCTTATTGGGACTTAGACTTCGATTTCGACCCCGAATTCCATCCTAACCCTTTCTCCCTCGCTGACCGCGAGAATCAGGTCAATTTCGTAATGGATCTCTTTCACCAGCGCGTCGAACAGTCGCAACTCACCGATCCCCTCTCTAATGACGCCTTTTTCGGTGTCATCGACGCCCTCGATGCCGTCGACCTTGGCTTCCCCGCCGCCGACGATTTATTCGTCGGACGCCGGCTCTCCGTCGGATCTGACTCCGACGAATCGCTCTTCCACTCCGGAAACGTCGGCAGCGTGTTTGGGATGTGCACGCACTCGGAGGAAGAGTACAACGTGAACGACGACGTTTCGAGCATCCCTCTCTGCTTGGACGCGCTTCAATTGGAAGACAGCAGAGACAGTTATGAGGATTTCGAGTGGGAGGAAGTGGTCGACGAGAGAGAAGTTCTGAGCATGCTCGACGACACCTCCGTTTCCGTCTCTGTGGGAATCGAAGAGGAAAGGGAGGAGGAAGTAGAATTTGAATTGGAGGCCAACAATTTGGGGTGGCAGGTTCTGTTGAACGCCAATGTGGAGGGAACGAATTCCGAGCCTTATTTCGGGGACAACGAGGATTTCGTATACGCCGCGGAGTACGAAATGTTCGGCCAATTCAACGAGGAGTCATTCGTTGGGAAGCCTCCGGCTTCCGTCTCCGCCGTGAGGAGCCTTCCGGCGGCGGTCGTGAGCGCTGCTGACGTGGCTAAGGAAAACGCGGTTTGCGCGGTCTGTAAGGAGGAGTTTGGCGTTGGGGAAGGGGTGAAGCAGTTACCGTGTTCGCATCGTTACCATGGGGACTGCATTGTGCCATGGTTGGGGATAAGGAACACGTGTCCTGTTTGTCGCTTTGAGTTTCCCACTGATGATGCTGATTATGAGCGGAGGAAGGCACATAGATCTGTTATGTGA 1011 0.547 MADVTTYPRHHLHPDDDQNLIPFPYWDLDFDFDPEFHPNPFSLADRENQVNFVMDLFHQRVEQSQLTDPLSNDAFFGVIDALDAVDLGFPAADDLFVGRRLSVGSDSDESLFHSGNVGSVFGMCTHSEEEYNVNDDVSSIPLCLDALQLEDSRDSYEDFEWEEVVDEREVLSMLDDTSVSVSVGIEEEREEEVEFELEANNLGWQVLLNANVEGTNSEPYFGDNEDFVYAAEYEMFGQFNEESFVGKPPASVSAVRSLPAAVVSAADVAKENAVCAVCKEEFGVGEGVKQLPCSHRYHGDCIVPWLGIRNTCPVCRFEFPTDDADYERRKAHRSVM 336
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01444 336 SMART ring_2 275 315 IPR001841 -
Phco8g01444 336 PANTHER SI:CH211-59O9.10 44 321 - -
Phco8g01444 336 ProSiteProfiles Zinc finger RING-type profile. 275 316 IPR001841 -
Phco8g01444 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 237 322 IPR013083 -
Phco8g01444 336 Pfam Ring finger domain 275 316 IPR001841 -
Phco8g01444 336 SUPERFAMILY RING/U-box 268 322 - -
Phco8g01444 336 FunFam E3 ubiquitin-protein ligase RING1-like 237 322 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco8g01444 Phco-Chr8 14927619 14928629 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01444 8 14927619 14928629 Phco8g01444 8 14927619 14928629 ECH