Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01432 ATGCGACGACGGGCTGCCGATTATCGGCGCCCGGTACGACGGAGGTTTTCATATTGGATCTGGCTTCTCCTCGCCTTCTCCTCTGTCCTAGCTCTTCTTCTCTTCCTTCTCCAACACAACCACCACCACCAAGATCCGCATCATTATCCTTTGCCGGAGAGAAATGCAAGAGTTGAACATTTTGCCAAGGAGAGTTTGAATTTTACTCAAGAGATTTTAAGTGTAAAATCATTTTCACGACAGTTAGCAGAACAAATGATTCTGGCCAAAGCTTATGTGGTTATTGCCAAAGAACATAACAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAATTGCCAGCTTTTGCTTTCAAAAGCGGCCATCACTGGTGAGCCCATCACGTTGGAGGAAGCAGAGCCAATTATTAAAAGCCTTTCTCTTCTAATGTTTAAGGCACAAGATATCCATTATGACATTTCAACCACAATAGTAACCATGAAATCACATATTCAAGCTCTAGAAGAGCGAGTCAATGCAGCAATAGTTCAAAGCACCGTGTTTGGTCAAATAGCAGCTGAAGCAGTATCTAAGAGTCTTCATTGCCTAAATGTGAAACTCATGTCTGATTGGCTAAAGATACCATCTCTCCAGGAACTCTCAGATGAGAGGAAAAACTCCCCACGGCTTGTGGACAACAATCTATATCATTTCTGCATATTTTCAGATAATGTACTGGCAACATCTGTAGTTGTAAACTCAACTGTCTCCAATGCTGACCATCCAAAGCAATTGGTCTTTCACATTGTCACTAATGGAGTCAGTTATGGGGTAATGCTAGCATGGTTTCTACGTAATGACTTTAAAGGAGCCACCATAGAGATACAGAACATTGAGGAGTTTCATTGGTTGAATGCATCTTATTCTCCTCTTGTCAAGCAGCTTCTCAATCCTGATTCAAGAACCTTCTATTTCGGAGCATATCAAGATTTAAATGTTGAACCCAAAATGCGGAATGCCAAGTATCTGTCTTTATTGAATCATCTTCGATTTTACATCCCTGAGATTTATCCGCAACTAGAGAAGGTTGTCTTCCTGGATGATGACCTTGTTGTCCAGAAGGATCTGACCCCTCTTTTCTCCCTGGATTTGCATGGGAATGTTAATGGTGCTGTTGAAACTTGTCTCGAAGCCTTTCATCGATACTACAAGTATCTCAACTTCTCAAATTCGGTTATTAGCACGAGATTCGATCCACAGGCATGTGCATGGGCATTTGGTATGAACATTTTTGACTTGGTTGCATGGAGGAAGGCAAATGTGACCACAAAATATCACTATTGGCAAGAGCAAAATGCTGACGGGACCCTCTGGAAGCTGGGGACACTTCCTCCCGCTCTTCTGTGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAATATTGACAATCGCCTCATTGAAAGTGCGGCAGTCATTCACTTCAACGGGAACATGAAGCCGTGGTTGAAGTTAGCCATAGGCAGATACAAGCCACTATGGGACAAGTACATAAATCAAAGTCACCCTCATTTTCAAGATTGTGTCACAAGTTGA 1611 0.4233 MRRRAADYRRPVRRRFSYWIWLLLAFSSVLALLLFLLQHNHHHQDPHHYPLPERNARVEHFAKESLNFTQEILSVKSFSRQLAEQMILAKAYVVIAKEHNNLHLAWQLSSKIRNCQLLLSKAAITGEPITLEEAEPIIKSLSLLMFKAQDIHYDISTTIVTMKSHIQALEERVNAAIVQSTVFGQIAAEAVSKSLHCLNVKLMSDWLKIPSLQELSDERKNSPRLVDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTNGVSYGVMLAWFLRNDFKGATIEIQNIEEFHWLNASYSPLVKQLLNPDSRTFYFGAYQDLNVEPKMRNAKYLSLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSVISTRFDPQACAWAFGMNIFDLVAWRKANVTTKYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWDKYINQSHPHFQDCVTS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01432 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 534 IPR029044 -
Phco8g01432 536 FunFam Hexosyltransferase 233 529 - -
Phco8g01432 536 CDD GT8_like_1 231 524 - -
Phco8g01432 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 233 533 IPR029044 -
Phco8g01432 536 Pfam Glycosyl transferase family 8 235 510 IPR002495 GO:0016757
Phco8g01432 536 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 63 534 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01432 Phco-Chr8 14830405 14833756 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01432 8 14830405 14833756 Phco8g01432 8 14830405 14833756 ECH
Phco8g01432 8 14830405 14833756 Phco7g02430 7 42436135 42439531 PCT