Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01422 ATGAGGTGGGAAAAGGTTGAGGTGAAGGCGATAGGCACAGAGGGTGGTGGAGGTGGAAATGAGGTGTATGGGCCAGGGAAGAGGTGGGGTCACACCTGCAACGCCGTCAAAGGTGGCAGACTTGTCTATGTCTTCGGTGGATACGGCAAAGATAACTGTCAGACCAACCAAGTTCATGTCTTTGACACTGTGAAGCAGACTTGGAGCCAACCTACTTTAAAAGGCTCCCCACCTAATCCTAGGGACAGCCACACTTGCACAGCCATTGGTGATAATCTGTTTGTGTTTGGGGGTACAGATGGGATGAACCCTCTCAAGGATTTGCACATTTTAGACACTTCGTTGCATACATGGGTTTCTCCCACCATAAGAGGAGAAGGGCCACCAGCACGTGAGGGTCATAGTGCAGCAGTTGTTGGAAAACGCCTATTCATATTTGGTGGTTGTGGAAAATCTGCAGATAGTAATAATGAGGTCTACTACAACGATCTTTACATATTAAATACAGAGACATTTGTCTGGAAGTGTGCTACAACATCAGGCTCTCCACCGTCTCCTCGTGATAGCCACTCTTGTTCATCTTGGAAAAATAAAATTATTGTAATAGGAGGTGAAGATGGACATGATTATTATTTGTCTGATGTCCATATCCTTGATACTGATACTTTAATCTGGAGGGAGCTGAGTGCATCAGGCCAATTGTTGCCTCCTCGAGCTGGTCATTCGACTGTTTCTTTTGGCAAGAACTTGTTCGTTTTTGGGGGATTTACAGATGCCCAAAATCTCTATAATGACCTTTATATGCTTGATATTGACACTGGTGTTTGGACAAATGTTACATCTGCAACCAATGGTCCTTCTGCTAGATTTTCTGTGGCTGGTGACTGTTTAGACCCTTTCAAGGGGGGTGTTCTTGTATTCATAGGTGGTTGTAATAAAAGTCTTGAGGCCCTGGATGATATGTATTACCTATATACAGGGATTGCTCGGGAAAGTGAACAGAGACCAGAGAAGTTATCTTTAAGGAAGCAATTGAAACTGAAGTGCCAAGAACAAAATCCCAATCCTAGCCAAAATCAAGTTCTAGTAAGATATGGTGTGGGTTCTGATATGGGCCAGATCATGTCAGTGTTGAATTATAGCCAGCCAAGTAGGCTAAATATCCCAGTAAATCAATCCCTACCTCCTGGAAAGAAAATGTTTGAAGCCAAGGTAACCGAGAACATCTCAGAAGGATATAGTATTGAAACTGTTATTGATGGAAAGCCTCTTCGTGGAATACTGTTTTTAAACAAGCCAAACTCTCTGTACTCAGCTGCTCAGACTCCCAGTAGAAAAAGGACTCTTGGTGAAATTGACGGTGTTGTCTCCAATGGTATACACTCTAACCAATTAAAGACTCCTAAATTACCTAAGCAAAATCAAATGGAAAACCAAGAAGCATTTTGTGGAGATAGTTCAGAATCTCATGAACACCGCACTGAACCCATTCCAGTGGTAATGTCAAGTAACCCAATGACTGCCGATGCTTCTGATACCCATAAGGTTTCTGCCAACCCAGAACCAGAAGCTGCTGCTTTGAATCGGAATGATGAAAAACATGAAACACCCATATCCTTAAGTGGAAACTTGAAAAAGGCAAATGATGTGACAAGTTCCAAAGATGAGGTGCAAACAAATGTGCTAATTTCCAACTTCGAAGTTAGAAGACATGATACAAAATTTGATGCTCCAAATTACAACACTGAATTTCAGAAACCTGCTGCATCTGAGAGTGCTTTGTGCCTGTCAAATCAAGGTGCAGTGGCGGATTCCACAACTCCAACAATAGAATGCAGCGAAGCAGGAAAATTAATTTGA 1860 0.4253 MRWEKVEVKAIGTEGGGGGNEVYGPGKRWGHTCNAVKGGRLVYVFGGYGKDNCQTNQVHVFDTVKQTWSQPTLKGSPPNPRDSHTCTAIGDNLFVFGGTDGMNPLKDLHILDTSLHTWVSPTIRGEGPPAREGHSAAVVGKRLFIFGGCGKSADSNNEVYYNDLYILNTETFVWKCATTSGSPPSPRDSHSCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLIWRELSASGQLLPPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYMLDIDTGVWTNVTSATNGPSARFSVAGDCLDPFKGGVLVFIGGCNKSLEALDDMYYLYTGIARESEQRPEKLSLRKQLKLKCQEQNPNPSQNQVLVRYGVGSDMGQIMSVLNYSQPSRLNIPVNQSLPPGKKMFEAKVTENISEGYSIETVIDGKPLRGILFLNKPNSLYSAAQTPSRKRTLGEIDGVVSNGIHSNQLKTPKLPKQNQMENQEAFCGDSSESHEHRTEPIPVVMSSNPMTADASDTHKVSANPEPEAAALNRNDEKHETPISLSGNLKKANDVTSSKDEVQTNVLISNFEVRRHDTKFDAPNYNTEFQKPAASESALCLSNQGAVADSTTPTIECSEAGKLI 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01422 619 Gene3D - 179 331 IPR015915 GO:0005515
Phco8g01422 619 MobiDBLite consensus disorder prediction 500 519 - -
Phco8g01422 619 MobiDBLite consensus disorder prediction 500 514 - -
Phco8g01422 619 PANTHER KELCH REPEAT DOMAIN 2 118 - -
Phco8g01422 619 SMART kelc_smart 92 141 IPR006652 GO:0005515
Phco8g01422 619 SMART kelc_smart 249 295 IPR006652 GO:0005515
Phco8g01422 619 SMART kelc_smart 198 248 IPR006652 GO:0005515
Phco8g01422 619 SMART kelc_smart 41 91 IPR006652 GO:0005515
Phco8g01422 619 SUPERFAMILY Galactose oxidase, central domain 225 317 IPR011043 -
Phco8g01422 619 SUPERFAMILY Galactose oxidase, central domain 24 246 IPR011043 -
Phco8g01422 619 Pfam Kelch motif 128 172 - -
Phco8g01422 619 Gene3D - 1 178 IPR015915 GO:0005515
Phco8g01422 619 Pfam Galactose oxidase, central domain 186 230 - -
Phco8g01422 619 Pfam Galactose oxidase, central domain 237 283 - -
Phco8g01422 619 Pfam Galactose oxidase, central domain 40 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01422 Phco-Chr8 14680187 14686569 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01422 8 14680187 14686569 Phco8g01422 8 14680187 14686569 ECH
Phco8g01422 8 14680187 14686569 Phco7g02422 7 42347273 42352925 PCT