Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01410 ATGGCACAAACACAAACCCGGAGACCCGTTTCAAGCATCCTCGATTCCCTGGGGGAAGAAATCGTGAGAATCATCGCACCCGTTTCAATATGCATGTTCTTGGTCGTAATATTGGTCTCAATTCTGAACACGGATTCTTCTCTCTTCGACGCATCGATGAGCATGGTCACCATGGCCTACACCGAGACAACCTCAGACTCCACCTGGGACAAATTCCTTGGTGCCCTTTTGAACTCCTTGGCTTTCGTCGTCCTCGTCACCTTCGCAACCTTCATCCTGGTCCTCCTCTTCTACTTCCGATGCACCAGATTCTTAAAACTCTACATGGCTTTCTCCACTTTCATCGTGCTGGGGTTACTCGGCGGTGAAGTCTCTCTGTTCTTGATCCAACAGTTTAACACTCCCGTTGATTGCATTACGTTTTTCCTCTTGCTGTGTAATTTCGCCGTTGTGGGTGTTTTGACCGTGTTTATGTCAAAAATGGCGATTTTTGTGACGCAGGGGTATTTGGTTGTTATTGGAATATTGATTGCTTATTCGTTTACTATGTTGCCTGAGTGGACCACCTGGGCCTTGCTTGTTGCTATGGCGCTGTATGATGTGGCTGCAGTTTTGTTACCAATTGGGCCACTAAGGCTTTTGGTGGAGCTTGCAATATCAAGGGATGAGGAAATTCCCGCATTGGTTTATGAGGCTAGGCCAGTGAACCGTGGTAATTTGAATCCTAGGGATCTTGTGCAGAGGCGGCGGTTGTGGAGGGAAAGGAGGGTTGAGAATTCAAATCTCCAAACTGATTCCAACTCAGCGTTGGGTCATGGCCCCAGGGTTGAATTCCCCTCCGATTCTGATGCAAGTCCCAGCAATAACGCAAACATGGTTAGGGGAATTGCCTCTAGAAATGCAAATCTGAGAGCTAATAGTTCTGGTGCTTCTTATGGTTACGGAAATTTGGTGACTGCAGAAGAGGAACCGGCGCGAGTTCATGAGACTGATTCAGACCTTTCTGCACCCTTGATTGATCGTGGAATGAATGTCCAGCACGGTAGGGGGGAAGATGCTGTGCCAAGTGAGAATTTGATGCTAGAAGGAATTGGATTGGGTTCTTCTGGTTCAATCAAGTTAGGGCTGGGTGATTTTATCTTCTACAGTGTTTTGGTTGGCAGGGCGGCAATGTATGATTTTATGACGGTGTATGCATGTTACCTTGCTATCATTGCGGGTCTTGGCATAACTCTGATCCTTTTGGCTTTATATCAGAAAGCTTTGCCTGCTCTTCCTGTGTCAGTAGCACTGGGTGTGTTGTTTTATTTCTTGACCAGGCTCTTACTTGAAGTATTTGTAGTACAATGTTCTTTAAATCTCCTGTTGTTCTAA 1374 0.4629 MAQTQTRRPVSSILDSLGEEIVRIIAPVSICMFLVVILVSILNTDSSLFDASMSMVTMAYTETTSDSTWDKFLGALLNSLAFVVLVTFATFILVLLFYFRCTRFLKLYMAFSTFIVLGLLGGEVSLFLIQQFNTPVDCITFFLLLCNFAVVGVLTVFMSKMAIFVTQGYLVVIGILIAYSFTMLPEWTTWALLVAMALYDVAAVLLPIGPLRLLVELAISRDEEIPALVYEARPVNRGNLNPRDLVQRRRLWRERRVENSNLQTDSNSALGHGPRVEFPSDSDASPSNNANMVRGIASRNANLRANSSGASYGYGNLVTAEEEPARVHETDSDLSAPLIDRGMNVQHGRGEDAVPSENLMLEGIGLGSSGSIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGITLILLALYQKALPALPVSVALGVLFYFLTRLLLEVFVVQCSLNLLLF 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01410 457 FunFam Presenilin 347 448 - -
Phco8g01410 457 PRINTS Presenilin family signature 183 190 IPR001108 GO:0004190|GO:0016020|GO:0016485
Phco8g01410 457 PRINTS Presenilin family signature 200 217 IPR001108 GO:0004190|GO:0016020|GO:0016485
Phco8g01410 457 PRINTS Presenilin family signature 25 35 IPR001108 GO:0004190|GO:0016020|GO:0016485
Phco8g01410 457 PANTHER PRESENILIN 9 457 IPR001108 GO:0004190|GO:0016020|GO:0016485
Phco8g01410 457 Gene3D Presenilin 365 449 IPR042524 -
Phco8g01410 457 Pfam Presenilin 18 447 IPR001108 GO:0004190|GO:0016020|GO:0016485
Phco8g01410 457 MobiDBLite consensus disorder prediction 262 289 - -
Phco8g01410 457 SMART psh_8 73 443 IPR006639 GO:0004190|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01410 Phco-Chr8 14591917 14593290 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01410 8 14591917 14593290 Phco8g01410 8 14591917 14593290 ECH