Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01409 ATGGGCAGGGCCCAAACATCACCAAAAATGGGCTTAGGCCCAGAAAGAGTCTCAGAACTGACCACAGCAATGGCTTTCTTTGGTAGAATTGGGAATTTGTTAAGACAGACAGCTAGCAGACAGGTTAGTTCAGAGTTGCGTTCGTCCCCTTCCTTTTTCCAGGCTATACGCTGTCTGTCTTCTGCTCCAAGCTCCAAGCTGTTTATAGGAGGTGTTTCGTTTTCCACTGATGAACAAAGCTTGAGGGAAGCTTTTTCAAAATATGGTGAAGTTGTTGATGCAAGGATAATTATGGATCGTGAAACTGGTAGATCCAGGGGGTTTGGATTTGTTACATACACGTCTGTTGAGGAGGCATCGAGTGCCATTCAGGCCTTGGATGGTCAGGACCTTCATGGTCGCCCTATTAGGGTAAATTATGCTAATGAAAGAACTCGTGGATATGGCGGTGGCGGTGGCTATGGAGGTGCATATGGTGGTGGTGGCTATGGTGGTGGCGGCGGTGGCTACGGTGGTGGTGGTGGCGGCTACGGTGGAAATGCTGGAGGTGGTTATGGTGGCTATGGTGGAAATGCTGGAGGTGGTTATGGTGGTGGTAGCTATGGTGGAAATGCTGGTGGTGGTTATGGTGGTGGTGGCGGCTATGGTGCAGGTGGCAATTTGGGGGACAGTGGCTCTGGCAATAACTATCCTGCTGCTGACAGTTTTGGAGCTAGTGGTGGCAGCTACAGTGGTAATTTTGGTGATGCTGGTCGAGTAGGCAATCATGAAAGTTCTACTGGTTTTGGCAGTAGTGGATATGATGGAAGTGCTGTGGATGGTAATGCTGCAGGTACTGGCACCAGCTTTGGTGGTGGAAGTGGTCAATTTGATAGCAAAGCAAGCAGCAACGGAGATGAGGATTACAGGGATGACAATGACGATGCTGATAATTTTGCCAAAAGGGCTTGA 951 0.4921 MGRAQTSPKMGLGPERVSELTTAMAFFGRIGNLLRQTASRQVSSELRSSPSFFQAIRCLSSAPSSKLFIGGVSFSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFVTYTSVEEASSAIQALDGQDLHGRPIRVNYANERTRGYGGGGGYGGAYGGGGYGGGGGGYGGGGGGYGGNAGGGYGGYGGNAGGGYGGGSYGGNAGGGYGGGGGYGAGGNLGDSGSGNNYPAADSFGASGGSYSGNFGDAGRVGNHESSTGFGSSGYDGSAVDGNAAGTGTSFGGGSGQFDSKASSNGDEDYRDDNDDADNFAKRA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01409 316 FunFam Glycine-rich RNA-binding protein 3, mitochondrial 35 185 - -
Phco8g01409 316 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 23 232 - -
Phco8g01409 316 Gene3D - 34 163 IPR012677 -
Phco8g01409 316 CDD RRM2_NsCP33_like 66 141 - -
Phco8g01409 316 MobiDBLite consensus disorder prediction 254 316 - -
Phco8g01409 316 SUPERFAMILY RNA-binding domain, RBD 62 175 IPR035979 GO:0003676
Phco8g01409 316 SMART rrm1_1 66 139 IPR000504 GO:0003723
Phco8g01409 316 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 67 137 IPR000504 GO:0003723
Phco8g01409 316 MobiDBLite consensus disorder prediction 275 295 - -
Phco8g01409 316 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 65 143 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01409 Phco-Chr8 14588706 14591819 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01409 8 14588706 14591819 Phco8g01409 8 14588706 14591819 ECH