Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01404 ATGGAGGGCGAGAGTGCGAAGAAGAGTAGCGAAAGCAGTGTCAACGGTCAACCCCGTGTGGGTTTACTATACGATAGGAGGATGTGCAGGCACCACACGCCGAACAACGAGGACCACGTCGAGACTCCTAATCGCATTAGGTCAATTTGGAACCAACTCGAGAGCGCCGGCATTCCTCAACGATGCCTGATTCTGGAGGCCAAGAAAGCCGAAGACAAACATCTGCGGTTAGTGCATTCCAGAATTCATGTAAATCTGATTAAGAACATTAGCTCCAAGCAGTTCAGTTCGCGGAGACCCGAGATTGCCTCCAAATTGAATTCCGTATATTTTAATGAAGGTTCATCTGAAGCTGCGTACCTTGCTGCTGGCTCTGCAGTACAGGTTGTTGAAAAAGTGGCAAGTGGGGAATTGGATTCGGCTGTTGCCATTGTTAGGCCTCCAGGTCATCATGCAGAGCAGAATGAAGCTATGGGATTTTGTCTTTTCAACAATGTGGCAGTTGCTGCAAGATATCTCTTAGACGAAAGACCCGATTTAGGTGTGAAGAAAATTTTAATTGTTGATTGGGATGTCCATCATGGAAATGGTACTCAAAAAATGTTCTGGAATGACTCTCGAGTTTTATTCTTCTCCGTTCACAGGCATGAATTTGGGAGTTTTTATCCTGCTAATGACGATGGATTTTATACTAAGGTGGGAGAAGGAGAAGGTGCTGGATATAATATAAATGTCCCCTGGGAGAATGGGAGATGTGGTGATGCAGATTACTTTGCAGTGTGGGACCACATTTTGCTTCCTGTAACCAAAGAATTTAATCCAGACATAATTATAGTTTCCGCTGGATATGATGCAGCTGTTGGTGACCCTTTGGGAGGATGTCGTGTCACACCATTTGGTTATTCTGTTCTGTTGAAAGAGTTGATGAATTTTGCTGAAGGTAGGATTGTATTGATTTTAGAAGGGGGATATAATCTTGATTCCATTGCAAGATCAATGCATGCTTGCTTGGAAGTTTTGCTAAAAGACAAGCCTGTTATCAGATCCTTAGAGGCCTATCCATTTCAGTCTACATGGAATGTAATTCAAGCGGTTCGCCAGACGTTAAGTCCCTTTTGGCCTACACTTGCATCTGAACTACCACTAGAGTTAGTCTCACAAATAGCACCCCCTCCGCATACTCTAATTTCGAGCTCTGACTCTGAAGATGAGGATGAAGAGGGTGCACCAAGTTTAGAAAATGTTGGAGAACTTCTTGAGGATGTCATAAAACCACTTTCCAAACTGAAAGTTGATGCTGATGAAGAGATTCATGTTTCTAGTACTTGGCGATCTGAATTGTCAAATGTTTATATATGGTATGCCTCGTATGGATCAAATATGTGGAAAGCAAGATTTAATTGCTACCTAGAAGGTGGACAGGTGGAAGGTATGGTGAAGCAGTGTTCTGGTTCAGTGAACAGAACTCTGCCAAAGGAGATCATGTGGAAGACTTTCCCTTGTGATATATTCTTTGGTCGGGATTCATCGTATTCGTGGGGACTGGGAGGTGTTGCATTTCTTAATCCTGAAAAAAAACTTGAAGGCAAGACCCACATGTGCATGTACAAAATTTCGCTAGAGCAGTTCAATGATATTTTATTTCAGGAAAACATTATAAGCCTTGATGCGGGTTCTCCTTTATTTGATATAACCACCTTGAATGCTGTCTCTGACAAGGAGTTCAGCTTCCAGGAGGTTGTCAAGGGTGCTTGGTATGGTAATGTTGTCTACCTAGGAAAGGAGCAGGATATTCCTGTAATTACCATGACGTCTTCGCTTCTTGATATTGAACGTTTCAAATCTGGGAAGCTGCCATTACGTGCTCCTAATAAAGCATATGCCAACTCCTTAATTAAAGGGTTGGTAGAGGGAGAACAACTTTCGGAGGCGGAAGCCATTGCTTACATAGAAGTTGCTGCTAAATCTGTGATTATTGCATAG 1983 0.4281 MEGESAKKSSESSVNGQPRVGLLYDRRMCRHHTPNNEDHVETPNRIRSIWNQLESAGIPQRCLILEAKKAEDKHLRLVHSRIHVNLIKNISSKQFSSRRPEIASKLNSVYFNEGSSEAAYLAAGSAVQVVEKVASGELDSAVAIVRPPGHHAEQNEAMGFCLFNNVAVAARYLLDERPDLGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPANDDGFYTKVGEGEGAGYNINVPWENGRCGDADYFAVWDHILLPVTKEFNPDIIIVSAGYDAAVGDPLGGCRVTPFGYSVLLKELMNFAEGRIVLILEGGYNLDSIARSMHACLEVLLKDKPVIRSLEAYPFQSTWNVIQAVRQTLSPFWPTLASELPLELVSQIAPPPHTLISSSDSEDEDEEGAPSLENVGELLEDVIKPLSKLKVDADEEIHVSSTWRSELSNVYIWYASYGSNMWKARFNCYLEGGQVEGMVKQCSGSVNRTLPKEIMWKTFPCDIFFGRDSSYSWGLGGVAFLNPEKKLEGKTHMCMYKISLEQFNDILFQENIISLDAGSPLFDITTLNAVSDKEFSFQEVVKGAWYGNVVYLGKEQDIPVITMTSSLLDIERFKSGKLPLRAPNKAYANSLIKGLVEGEQLSEAEAIAYIEVAAKSVIIA 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01404 660 PRINTS Histone deacetylase superfamily signature 147 170 IPR000286 -
Phco8g01404 660 PRINTS Histone deacetylase superfamily signature 274 284 IPR000286 -
Phco8g01404 660 Gene3D Histone deacetylase domain 13 388 IPR037138 -
Phco8g01404 660 FunFam Histone deacetylase 15 13 390 - -
Phco8g01404 660 Pfam Histone deacetylase domain 39 339 IPR023801 -
Phco8g01404 660 PANTHER HISTONE DEACETYLASE 9-RELATED 13 393 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Phco8g01404 660 Gene3D - 442 656 - -
Phco8g01404 660 SUPERFAMILY Arginase/deacetylase 18 374 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01404 Phco-Chr8 14529662 14534714 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01404 8 14529662 14534714 Phco8g01404 8 14529662 14534714 ECH
Phco8g01404 8 14529662 14534714 Phco7g02242 7 39578775 39580234 PCT