Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01378 ATGAGTTCTTCTCCGCATCGTTCTCGAGGCGACGGCGAGAAAAGACCCAGGGTTTTCGACTCTAACGCCAAGACCATCTGTTGGTCCAAGGCTGATACTGTCGCCGGTCGTCACCCTGAGAGGTGGCGCAAAGACGCCGCCGGTAACATTGTCTGCAAACGTTTCTACAACTGTCTCGGCTGCCTCTGCTACGAGTACGATCACATCATTCCCTTTTCTAAAGGTGGCGAGTCCACAGCAGATAATTGTCAAATACTTCAATCAAGAGTTAACAGACTCAAATCGGACAAATATAACATTGATTCAAATCAATTGAAAGACTACTCTTGTGAGGTTAATTTTACTGATAAGGAGCTTGATATAATTGAGATGGCTGTTTACGGAGATGTGATGCGGCCTGGAAATCAGTGCCGTTGCAGAACTATTGCTGAGAAGCTTGGCAAATTCAAAGCAAAAGATGACAAAGATGCTTGTAAGTTGCCACAGGGATGA 492 0.4553 MSSSPHRSRGDGEKRPRVFDSNAKTICWSKADTVAGRHPERWRKDAAGNIVCKRFYNCLGCLCYEYDHIIPFSKGGESTADNCQILQSRVNRLKSDKYNIDSNQLKDYSCEVNFTDKELDIIEMAVYGDVMRPGNQCRCRTIAEKLGKFKAKDDKDACKLPQG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01378 163 CDD HNHc 53 95 IPR003615 -
Phco8g01378 163 Pfam HNH endonuclease 65 96 IPR002711 GO:0003676|GO:0004519|GO:0008270
Phco8g01378 163 Gene3D - 20 116 - -
Phco8g01378 163 PANTHER HNH ENDONUCLEASE 7 141 - -
Phco8g01378 163 SMART HNH_5 46 92 IPR003615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01378 Phco-Chr8 14291374 14296930 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01378 8 14291374 14296930 Phco8g01378 8 14291374 14296930 ECH