Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01375 ATGTGCCACGTCAGCAACCACGTAGACAAGGGTGCCATCAACCCCAGCTTGGCCAAAAATATGTTGTCTGTATGCAGTTGCAGAGAGACACAACATAACACAACACAGAGAGGCACAGAGAGAGAAGGAGAAAGAGAAAGAGAAAGAGAGACGGGTCTAACTTCCAACGAGTGTTCGTATTCTCCTTTTCAGTCCACTACGCTTCCTTCTCTCCCTTCCCTCTTCTCCGTTAACCCTTTCCCCATTCACATTGTAATTCCATTTCCCCACCTGGCTTTACCAAAAAAAGGGAAAGAAAGAAGAAACAAAATAAAGCTTTCCATTGGATCACGTCACCCACCTTTGCTTTTGCTCTCTTCTCCCTCTGAATTGAGCATTTCCGAGTTCTATTGGCCTCTGATCGAATTGGGTATTTGCAAGATCTGCGGCTTCAATTGTTGGGGGCAAAAAGTTTTGATCTTGGTGGTGGACCAACCCAATTACCGGTTTGGATCCGATCGGGGTAGAAACAGCGCCATCAGATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGCTCATGAATGCACCGGAAGCATTTCATCCGTTACTTTTTCAACTCTTCAAGACACTAATCACTCTAGAGAAGGAAAAAATAAAGCCGTATGTGATTCATGGTGTTTTTGATTGTTGCTTCTCCCCGGATGTCTTGGAAGAAGATGAATATAGAGTTTATATGGGGGGGATTGTGGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTATTCAACTTCAGAGAAGGGGAGAGACGCAGCCAAATCTCAGACATATTGTCTCAATATGACATGACAGTTATGGAGTACCCTCGGCAGTATGAGGGCTGTCCTGTTCTGCCTTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTCTGGAGGGGCAACAAAATGTGCTTTTGATGCACTGTGAAAGGGGAGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGCGGGGAGCAGAAGACCCTTGAAATGGTCTACAAGCAAGCTCCAAGAGAACTACTACATGTATTGTCTCCTTTGAATCCACAGCCTTCCCATTTAAGATATCTTCAGTATATTTCCAGGAGAAATTTGGGTGTTGAGTGGCCACCATCGGAAACACCCTTATATTTGGATTGTCTGATTCTCAGAGTCCTTCCAACATTTGACGATGGAAAAGGTTGCAGGCCCGTTGTACGTGTTTATGGTCAAGACCCTTCAATTTCTGCCAATAGAAGTTCAAAGCTTCTTTTTTCAACTTCACAATCCAAAAAACATGTTCGCCACTACCTACAGGCAGAGTGTATGCTCGTGAAAATTGACTTGCATTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAGTGATGATTTTGTTCGTGAGGAATTGATGTTTAGAGTTATGTTTCATACTGCATTTGTGCGGTCAAATATATTGATGCTGAACCGTGATGAAATTGATATTTTGTGGGAGGCAAAGGACCTATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAACCACAGTCACGGTGAGAGAAGATGCAAATGAGACCGAGAGTGCTGAGACAGAAAGTGTTTCACCTGATGAGTTCTATGAAGTAGAAGAAATCTTCAGCAGTGTAATTGATGCACAAGAAGGTAAGACAGAGTATGATTCTCACGCTTTCCATGAAAATGCAGTGGATGATGAAACTCATAAGGAGGTCTGGAGGCTAGAGTCTGATCCTCATACTTTTGAGGATTGTTCGCCAGATGACAGGATCACCAAGCAGGTTGACAAGATGGATCCTGGTATTAATACTGTGAAAGACATCTCTATTGATGATGCACACTATAAATTTGATGGGAGCATAGATTCAGATCCTCATGCAGTGAAGGACATTGCTGTCGATGATGGAGAAATTAAGTCAACTTCCACTGCAGTTATTTCTGATATGATGAAACCTCCTCTGGAAACAAAGGAAGTTACCATGCATGTGCAACAACAATTTGAAGTCATTGAAAATGAATATGATGAAGATAAGGAGGCAACAGAAAAGGAGCTAGACTCCAAGGCTGGGCACCAGATGCTTGATTTGACTGAACAAAAATCTGGTAAACTACTTCCATCCAAGAAACAACCTCCATCCAACTTGAAGCCAGTTGGAGATACAGTTGCAGCCAAGCAAAAGATTAAACAGCAAGAAACCCATGGTTTTCAGGCAAAACAAGCTAAGCCAAATGCAGTAACTAGATGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCATGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCACTGACAAATTTGTCTTCCACAAAGGAGAAAATGGAAGATGCCAAAACAAGATCTTTGTCTGCTCCAGTTGTTTCTGCAGTTGTTGCTTCTATTGACAGGACTAATGACCTAAAAAGCCGGAAGGTGGCCACTTCAAAATCTTCTGGCTATATAGCGGCAGAAATAGATGAAAAAGATCTACCATCACCATTGTCATCAATTATAGAGACATCTTTTCAGTCGGATACTCCAGCACAACAACAGAGCTCAGAGCAACTGCCACAGCCTCCCTCACCTCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCAGCTCACAGTAGAGTCTCTTCACAAGTTTATGAATCCTCATCATTAAAGGATGATGTATCAGTTCAAGACTCTCCATCTCTTGGAGTATCACTATCTTCTTTGGGTGGAAAGGGGTCCCTCATGCCACCACCACCACCTCCACCGCCACTGCTGCCATCTTTAACTTCAACAACATTTAAGAGACAACCTGAAACTTCTCTTCCTTTCCCTCCACTCCCACCCCCACCCCCGCCCCCGCCCCCCTTTTTTGGGCAAAATATAGAGACTAGTGTATCTTTAACACTTCCTGCAACCCCTCTCCCATTTACAAGCACTGACGTTACATTGGATGTTTCTCAAGTGGGTACTGCAGTCCCCTCACAGCCTCCTCCACCGCCACCACCTCCAAGGTATGAAGTTTCATCTATTCCTCCTTTGACACCATTAGCATCACCTCTTCCAAAGAATGGAATTCCATCAGTTCCCCTTCCTCCCATGTTTCCTACAGCTTTAACACATAGGGCTCCACCTTCTCCTCCCCCCACAACCCCACCTCCAACTCGACCCTTGTCTCCCCCAACCCCTCCCCCTCCACCACCCTTAGCTAATTCACATATGTATTCAGCTACATCACATATACCTCCCCCTCCACCACCTTTAGCTAATTCACATATATATTCAGCTACACCACCTATACCTCCGCCACCACCTCCCCCTCCTTTTGGTAAAGCTTCACTACCTCCCTCTCCACCTCCTTTCAATAGACCTCCACCACCAGCACCACCACCACCTCCACCTCCACCTTCTTTCAGTCAAGCTCCACCACCACCCCCTCCACCCACACCTCCTTCCCCACCGCATCCTCTATCAAGTGTAGCCCCACCTCCACCTCCACCTCCTCCAATGTATAAAGCTGCACCTCCCCCTCCATCAAGTGGAGCCCCACCTCCCCCCCCACCACCTTTTCCTCCATCAAGTGGAGCCCCACCTCCTCCACCACCACCCCTTCCTCCATCAAGTATAGCCCCACCTCCACCTCCACCACCTTTTCCTCCATCAAGTGGAGCCCCACCTGCCCCTCCACCTCCAATGCGTGGAGCACCACCTCCACCACCACCTCCTCCAATGTATGGAACACCACCTCCTCCACCTCCTCCAATGTCTGGAGCACCACCTCCTCCACCTCCTCCAATGTATGGAGCACCACCTCCTCCACCTCCTCCAATGTATGGAGCACCACCTCCTCCACCTCCTCCAATGTATGGAGCACCACCTCCACCACCACCTCCTGGTGGTCGAGGACCACCTCCTCCACCACCACCTCCTGGTGGTCGAGGACCACCTCCTCCACCTCCCCCAATGTTTGGAGCACCACCTCCACCTCCACCTCCTGGTGGTCGAGGACCACCTCCTCCTCCTCCCCCAATGTTTGGAGCACCACCTCCACCTCCACCTCCTGGTGGTAGAGGACCGCCCCCTCCACCTCCTCCTGGTGGTGGAGGTCCTCCTCCTCCACCTCTGCCAGGTGTTCCTGGTGCTCCTAGACCTCCGGGGGGTGGACCTCCACCACCTCCACCAAAAGGTGCAAATATTGGAGCTGATCCAAGAGGGAGGGGACGTGGGTATGCACGCCCTACAGGGGTTGCACCCAAAAGATCCTCTTTGAAGCCTTTACATTGGAGCAAGGTTACAAGGGCACTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCACAAATTGCACCAGAGTTCGATGTTTCAGAGCTAGAGAAGCTTTTCTCCTTAAATGTTCCAAAACCTGCTGATTCTGGTGGAAAATCTGGAGGAAAGGGCAAGTCTGCTGGATCTAAATCTGACAGAGTTACCTTGGTTGATCTAAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCTCTGGACGAGTCAGTTTTAGATGTTGATCAAGTGGAAAATCTTATTAAGTTTTGTCCTACCAAAGAGGAGATGGATCTTATAAAGGGATACACCGGTGACAAGGAAGTTCTTGGGAAGTGTGAACAGTTTTTTTTGGAGTTGATGAAGGTGCCAAGGGTGGAATCAAAATTAAGAGTATTTTCATTCAAGATTCAGTTTGGTGCCCAGCTTACGGAATTTAAGAAGAGTTTAAACATTGTTAACTCTGCCTGTGAAGAGGTCCGAAATTCTGCTAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTCAAGTTAGATAGCCTTTTAAAGCTCACCGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTCTGCAAGGTCCTAGCTGATAAGTCACCCAAACTCCTTGATTTCCACCTAGACCTTGTTAGCCTGGAAGGTTCCACTAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAAGGATTAGAAAAAGTTAAACAAGAATTTGCTGCATGTGCAAATGACGGACCTGTTTCTGCGGTTTTCCATGAGAAATTGAAAGAATTTATTGGTCTATCTGAGTCAGAGGTAGCATCTCTAACAAACCTATATTCTGTAGTGGGTAGAAATGCTGATGCACTTGCGCTATATTTTGGTGAGGATCCTGCTCGTTGCCCTTTTGAGCAAGTTACCACGACTCTGCTAAATTTTATAAGGCTGTTTCGGAAAGCACATGAAGAAAATTGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAAAAGGCTAAGGGCATTAACTTGACAAAGAAGGGTGCAAAAGATAGTTGA 5637 0.4644 MCHVSNHVDKGAINPSLAKNMLSVCSCRETQHNTTQRGTEREGERERERETGLTSNECSYSPFQSTTLPSLPSLFSVNPFPIHIVIPFPHLALPKKGKERRNKIKLSIGSRHPPLLLLSSPSELSISEFYWPLIELGICKICGFNCWGQKVLILVVDQPNYRFGSDRGRNSAIRWRCSEGSSTGSRRIGFWRFPREFMLMNAPEAFHPLLFQLFKTLITLEKEKIKPYVIHGVFDCCFSPDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFREGERRSQISDILSQYDMTVMEYPRQYEGCPVLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHVLSPLNPQPSHLRYLQYISRRNLGVEWPPSETPLYLDCLILRVLPTFDDGKGCRPVVRVYGQDPSISANRSSKLLFSTSQSKKHVRHYLQAECMLVKIDLHCRVQGDVVLECIHLSDDFVREELMFRVMFHTAFVRSNILMLNRDEIDILWEAKDLFPKDFKAEVLFLDADAVIPDLTTVTVREDANETESAETESVSPDEFYEVEEIFSSVIDAQEGKTEYDSHAFHENAVDDETHKEVWRLESDPHTFEDCSPDDRITKQVDKMDPGINTVKDISIDDAHYKFDGSIDSDPHAVKDIAVDDGEIKSTSTAVISDMMKPPLETKEVTMHVQQQFEVIENEYDEDKEATEKELDSKAGHQMLDLTEQKSGKLLPSKKQPPSNLKPVGDTVAAKQKIKQQETHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALTNLSSTKEKMEDAKTRSLSAPVVSAVVASIDRTNDLKSRKVATSKSSGYIAAEIDEKDLPSPLSSIIETSFQSDTPAQQQSSEQLPQPPSPPPPPPPPPPPPPAHSRVSSQVYESSSLKDDVSVQDSPSLGVSLSSLGGKGSLMPPPPPPPPLLPSLTSTTFKRQPETSLPFPPLPPPPPPPPPFFGQNIETSVSLTLPATPLPFTSTDVTLDVSQVGTAVPSQPPPPPPPPRYEVSSIPPLTPLASPLPKNGIPSVPLPPMFPTALTHRAPPSPPPTTPPPTRPLSPPTPPPPPPLANSHMYSATSHIPPPPPPLANSHIYSATPPIPPPPPPPPFGKASLPPSPPPFNRPPPPAPPPPPPPPSFSQAPPPPPPPTPPSPPHPLSSVAPPPPPPPPMYKAAPPPPSSGAPPPPPPPFPPSSGAPPPPPPPLPPSSIAPPPPPPPFPPSSGAPPAPPPPMRGAPPPPPPPPMYGTPPPPPPPMSGAPPPPPPPMYGAPPPPPPPMYGAPPPPPPPMYGAPPPPPPPGGRGPPPPPPPPGGRGPPPPPPPMFGAPPPPPPPGGRGPPPPPPPMFGAPPPPPPPGGRGPPPPPPPGGGGPPPPPLPGVPGAPRPPGGGPPPPPPKGANIGADPRGRGRGYARPTGVAPKRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSLNVPKPADSGGKSGGKGKSAGSKSDRVTLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMDLIKGYTGDKEVLGKCEQFFLELMKVPRVESKLRVFSFKIQFGAQLTEFKKSLNIVNSACEEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLADKSPKLLDFHLDLVSLEGSTKIQLKSLAEEMQAIIKGLEKVKQEFAACANDGPVSAVFHEKLKEFIGLSESEVASLTNLYSVVGRNADALALYFGEDPARCPFEQVTTTLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGINLTKKGAKDS 1878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01375 1878 SMART PTEN_C2_2 406 546 IPR014020 -
Phco8g01375 1878 Gene3D Formin, FH2 domain 1461 1850 IPR042201 -
Phco8g01375 1878 Pfam Formin Homology 2 Domain 1468 1838 IPR015425 -
Phco8g01375 1878 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 408 544 IPR035892 -
Phco8g01375 1878 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 256 396 IPR029021 -
Phco8g01375 1878 Gene3D - 412 544 - -
Phco8g01375 1878 Pfam C2 domain of PTEN tumour-suppressor protein 407 544 IPR014020 -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 1010 1042 - -
Phco8g01375 1878 PANTHER FORMIN-J 1376 1872 - -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 991 1009 - -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 1854 1878 - -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 964 978 - -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 930 958 - -
Phco8g01375 1878 Gene3D Protein tyrosine phosphatase superfamily 225 411 IPR029021 -
Phco8g01375 1878 ProSiteProfiles C2 tensin-type domain profile. 408 547 IPR014020 -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 907 928 - -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 878 1473 - -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 1043 1121 - -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 1518 1540 - -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 743 765 - -
Phco8g01375 1878 SMART it6_source 1071 1878 IPR015425 -
Phco8g01375 1878 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1463 1864 IPR015425 -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 34 53 - -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 885 906 - -
Phco8g01375 1878 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1541 1866 - -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 1129 1448 - -
Phco8g01375 1878 Coils Coil 1745 1765 - -
Phco8g01375 1878 MobiDBLite consensus disorder prediction 29 56 - -
Phco8g01375 1878 Coils Coil 1839 1868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01375 Phco-Chr8 14225122 14243346 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01375 8 14225122 14243346 Phco8g01375 8 14225122 14243346 ECH