Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01365 ATGGGTTCTCCCGTTGAAGACCGATCAGAGATAGTGTTCTTCGATGTGGAGACCAGCGTTCCCACTCGAACAGGCCAGGGTTTTGCCATTCTCGAATTCGGAGCCATTTTGGTTTGCCCCAAGACGCTCACGGAGCTCCACAACTATTCCACTCTCGTCCGACCCGCCCATCTCTCCGTCATCTCCCCCTTGTCCGAGCGTTGCAATGGCATCACCGCCAACGCTGTCGCCACCGCGCCGACTTTCGCCGACATTGCTCACCTCGTTTACGACCTTCTTCACGGGAGGATTTGGGCTGGTCATAATATCATAAGGTTCGACTGTGTTCGGATTAGAGATGCTTTTGCTGAGATTAATCAGCCGCCACCTGAACCTAAGGGGACTATTGACTCCCTAGTCTTGTTGACTCAAAAGTTTGGAAGAAGAGCTGGTGACATGAAGATGGCTACTCTTGCTACTTATTTTGGACTTGGACGCCAGACACATAGGAGCTTAGATGATGTTCGGATGAATCTTGAAGTCCTCAAATACTGTGCAACTGTTCTATTCTTGGAGTCAAGTCTCCCGGACATATTCACTGCAAACAGTTGGGTTTCACCAAATGCTACAACAAGAAGCCGCAGTAATGGGAAATCTCCATCTCAGGAGGGCTTATTAAATATTAACAAGGGTTCTGTATTACAATCTCCTGCTGTTGAATCCAAAGACAAAAGTCATCCTATAATTTCTTTTGCAATGAGCAGCCCAACAAGGGATGCCCAGAATATTACAGATCCTAATATAGTTCAATCGGATCCTTTTAATTTGAGTGCTCTGGAGGAAGAAATAAGTAGAGAACCCATTAAGTCAGATGTTTCCATGGTGGAAAAACCCATGCAGGAGTCATCTGATTTGGCTTCCTCGTCTTCTATGTTTCAGCCTTGCAGCAGCTCTATTCTTGTTTTAGAACCTGATGGAATATGTGTCCCTTCTATTGATGCATCTCTTGTTCCATCTTTTCATGGCAGTCAAAGGATAGAATTACTGCATGAAGGTTTCCCATTTCATCTTCATTGTACTGATTTGAAAGTGCGGTTTGGAATAAACACAAGGTTTTCTGATAATGCTGGCCGGCCTCGATTGAGTTTTGTGGTTGATTCATCACCAAGTCTATGCAACGTTCTTGATGCATGTGACCGCGTTGCTCAGAAGTTAACAGTGGATTCTGGTAGCATCTCTGATTGGAGGCCTGTTGTCATTAGGAAAGAAGGTTTCTTCAACTATCCTACTATCAGATTGCACATACCTACAGCAGTAGTCGCAGACGTTGCCATTTATGCCACAGAAATATATCAGAAAGAATCTTCTGGAGCAGTGCAAAGACTTCTCTTCAGTAGATTTGATGCTGCAGAACTTGGTTCCTTGTTCATGCCTGGGACATTTGTTGATGCCTTCTTCTCCTTAGATCCGTATGACTATCAGCAGAATGCAGGGATTAAATTAGTTGCCAAAAAATTGATCATTCATTGCAAATAG 1515 0.4436 MGSPVEDRSEIVFFDVETSVPTRTGQGFAILEFGAILVCPKTLTELHNYSTLVRPAHLSVISPLSERCNGITANAVATAPTFADIAHLVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQPPPEPKGTIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTANSWVSPNATTRSRSNGKSPSQEGLLNINKGSVLQSPAVESKDKSHPIISFAMSSPTRDAQNITDPNIVQSDPFNLSALEEEISREPIKSDVSMVEKPMQESSDLASSSSMFQPCSSSILVLEPDGICVPSIDASLVPSFHGSQRIELLHEGFPFHLHCTDLKVRFGINTRFSDNAGRPRLSFVVDSSPSLCNVLDACDRVAQKLTVDSGSISDWRPVVIRKEGFFNYPTIRLHIPTAVVADVAIYATEIYQKESSGAVQRLLFSRFDAAELGSLFMPGTFVDAFFSLDPYDYQQNAGIKLVAKKLIIHCK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01365 504 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 8 493 - -
Phco8g01365 504 MobiDBLite consensus disorder prediction 200 220 - -
Phco8g01365 504 SUPERFAMILY Ribonuclease H-like 10 180 IPR012337 -
Phco8g01365 504 SMART exoiiiendus 10 184 IPR013520 -
Phco8g01365 504 FunFam Exonuclease family protein 4 182 - -
Phco8g01365 504 CDD DEDDh 12 176 - -
Phco8g01365 504 Pfam Exonuclease 12 175 IPR013520 -
Phco8g01365 504 Gene3D - 5 182 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01365 Phco-Chr8 14175639 14179422 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01365 8 14175639 14179422 Phco8g01365 8 14175639 14179422 ECH