Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01362 ATGGAAACTGAAATAATCCAGGGACCTTGGGGATTTCGCTCTCTGTCCAAATTCATAGTGTGCACCATTTCTGGGGCCCTCACCGTGTGTTTTGCCATTGCTGGTGCAATGACAGGAGCTATAGCTGGAGCTTTAGCAGCTAAGGCTACAAGGAGTGGTCTTCTCCGGGGAGTTTCATTGGGTGCCATTGCCGGGTCTATACTCTCAGTGGAGGTGTTGGAAGCTTCCCGTGCATACTGGTGTATGGAACAAACTGGCTCACGGGGAGCATCATCTATGGCAGATTTCATAGAGGAACTTGTTCGGGGGAGGCTTGTTGAGGAATCCCTTACACCTGCCATTTTAACTGCCTACAATTTGCAGTTTGAGCAGGTTGGCATTGCTAATGCAGGCTATGATGAGATTCATGATGTTCATGGCTTAGTGGCGCCCAGAGGATTGTCAGGAGATTCACTGAAGAGGTTACCGCACCATATGATCTCAAAGGATATGAAGGCAGAAAATACTTGTTGTACAATATGTTTGCAGGATATTGAAGTAGGCGAAATTGCAAGAAGCTTACCTCGCTGTCACCATACATTTCACTTGATATGTGTGGACAAATGGCTTGTAAAGAATGATTCCTGTCCTGTCTGCAGACAGAATGTGTAA 651 0.4639 METEIIQGPWGFRSLSKFIVCTISGALTVCFAIAGAMTGAIAGALAAKATRSGLLRGVSLGAIAGSILSVEVLEASRAYWCMEQTGSRGASSMADFIEELVRGRLVEESLTPAILTAYNLQFEQVGIANAGYDEIHDVHGLVAPRGLSGDSLKRLPHHMISKDMKAENTCCTICLQDIEVGEIARSLPRCHHTFHLICVDKWLVKNDSCPVCRQNV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01362 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 216 IPR013083 -
Phco8g01362 216 SMART ring_2 171 212 IPR001841 -
Phco8g01362 216 Pfam Ring finger domain 171 213 IPR001841 -
Phco8g01362 216 CDD RING-H2_NIPL1-like 170 213 - -
Phco8g01362 216 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 15 215 IPR044523 -
Phco8g01362 216 SUPERFAMILY RING/U-box 152 216 - -
Phco8g01362 216 ProSiteProfiles Zinc finger RING-type profile. 171 213 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01362 Phco-Chr8 14160174 14163391 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01362 8 14160174 14163391 Phco8g01362 8 14160174 14163391 ECH