LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco8g01344	ATGAACATGACAAAAGAAGAAAAACGAACCCTTACCCAACTTAGGGTATTGTTTTTAGGCAAACAGGCAGAGGCAGGGGTATGGGAAAAAGGACAAAGACACACACTTTCCACAAACCTTCATCATCTCAAAATCTATCCACATCAAATCGCCACCCTCAATTCCACCCATCCAACGCTCACAAACCACCTCAAATCCCAACCGTATCCCCTGAAACAAACACACATACATAAAAAAAAATCAAACCCCGCTCACTGTCTCACTCTCACTCCCCACTCTTTCACCATGAATTCTATTGCTCTCAAAACCTTCGTCGGCCTCCGCCAAACCTCGCCGGATGCACAGCATTTCGCCGCTCAGCCAAGACTTCCCCCTCCTCACCGCAAGTTAAGGATCGTGGCCGGGAAGTTCAGCCCAAAGCTGCAGGGACGCAACCTACGAGTAGCGGTGGTGGGCGGTGGTCCCGCCGGCGGAGCGGCGGCGGAGACGCTGGCGAAGGGTGGCGTGGAGACTTTCCTTTTCGAGCGGAAGCTGGACAACTGCAAGCCATGCGGGGGAGCGATTCCGCTCTGCATGGTGGGGGAGTTCGACCTGCCGCTGGACATCATCGACCGGCGGGTGACGAAGATGAAGATGATATCGCCGTCGAACGTGGCGGTGGACATTGGGAGAACGCTTAAGCCGCACGAGTACATAGGCATGGTCCGGCGAGAGGTGCTGGACGCTTACCTGAGAGAGCGGGCGAAGGAGAATGGGGCCAGTGTCATCAACGGGCTGTTCACGAAAATGGATATTCCGAAGGATAACAACACCCCCTACGTTATCCATTACTCTTCCTACGATAACAAAAGCAGTGGGGCTGGTGAGAAGCGTACCTTGGAAGTTGACGCTGTCATTGGTGCTGATGGCGCTAATTCTAGAGTCGCCAAGTCTATTGATGCTGGTGAATATGAGTATGCCATCGCTTTTCAGGAGAGGGTAAAAATTCCGGATGATAAGATGGCGTATTACGAGGACCTTGCGGAGATGTACGTGGGCGATGATGTTTCTCCGGATTTCTACGGGTGGGTATTTCCAAAATGTGACCATGTGGCTGTTGGCACAGGTACTGTGACACACAAGGGGGACATCAAGAAGTTCCAACTAGCAACAAGGAAAAGAGCAGAAGACAAAATTTTGGGAGGCAAGATCATCAGAGTGGAGGCTCACCCTATCCCGGAACATCCGCGGCCGCGAAGGTTGTTGGGAAGAGTGGCCTTGGTGGGTGATGCTGCTGGGTATGTAACGAAATGCTCCGGAGAGGGAATATATTTTGCGGCCAAGAGTGGGAGGATGTGTGCAGAGGCAATTGTTGAAGGTTCAGAGAATGGGAAGAGGATGGTGGAAGAAGGGGACTTGAGGAAGTACTTGGAGAAGTGGGATAAGACTTATTGGCCCACTTACAAGGTGTTGGATGTGCTTCAGAAGGTGTTTTACAGGTCCAACCCTGCGAGGGAAGCGTTTGTGGAGATGTGTGCCGATGAGTATGTGCAGAAGATGACCTTTGATAGCTATTTGTACAAGACAGTGGTGCCTGGCAATCCACTGGAGGATCTGAAATTGGCCATTAACACCATTGGGAGCTTAGTGAGGGCCAGTGCCATAAGGAGGGAGATGAATAAACTTAATGTATGA	1674	0.5137	MNMTKEEKRTLTQLRVLFLGKQAEAGVWEKGQRHTLSTNLHHLKIYPHQIATLNSTHPTLTNHLKSQPYPLKQTHIHKKKSNPAHCLTLTPHSFTMNSIALKTFVGLRQTSPDAQHFAAQPRLPPPHRKLRIVAGKFSPKLQGRNLRVAVVGGGPAGGAAAETLAKGGVETFLFERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRERAKENGASVINGLFTKMDIPKDNNTPYVIHYSSYDNKSSGAGEKRTLEVDAVIGADGANSRVAKSIDAGEYEYAIAFQERVKIPDDKMAYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKILGGKIIRVEAHPIPEHPRPRRLLGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVEEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGNPLEDLKLAINTIGSLVRASAIRREMNKLNV	557

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco8g01344	557	Gene3D	-	145	556	IPR036188	-
	Phco8g01344	557	FunFam	Geranylgeranyl diphosphate reductase	145	552	-	-
	Phco8g01344	557	NCBIfam	geranylgeranyl diphosphate reductase	147	544	IPR010253	GO:0015979\|GO:0015995\|GO:0045550
	Phco8g01344	557	PANTHER	GERANYLGERANYL DIPHOSPHATE REDUCTASE	144	550	-	-
	Phco8g01344	557	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	415	430	-	-
	Phco8g01344	557	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	147	169	-	-
	Phco8g01344	557	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	294	309	-	-
	Phco8g01344	557	Pfam	Pyridine nucleotide-disulphide oxidoreductase	147	320	IPR023753	GO:0016491
	Phco8g01344	557	NCBIfam	geranylgeranyl reductase	146	544	IPR011774	GO:0045550
	Phco8g01344	557	NCBIfam	geranylgeranyl reductase family protein	148	450	IPR011777	GO:0016628
	Phco8g01344	557	SUPERFAMILY	FAD/NAD(P)-binding domain	146	528	IPR036188	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco8g01344	Phco-Chr8	13999153	14001835	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco8g01344	8	13999153	14001835	Phco8g01344	8	13999153	14001835	ECH