Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01328 ATGTGCCCTTCCGCCACACTCCATCGCCACAACCCAATCCTCTTTTCTCTCTCTTCTGCCCTAATTCTCATTTTCCAACTCTTATTTACTCCAAACTCCATCCTTCTATTTCACTGTTCCAATTCTATTCCTGTCCAATCTCCCCCGCCATTAGGAAATTTTGAAATTTTGTTGCTGGAAGGCTTTGCTCACATGGGATCAGAGAGTGTGGCTCCGGCTGTTGAGACATCAAAAAGCAGGTCTTCTTCTGGTAAAATGAATCAAGGGAAAGTCCCCAGGAAAATTCACAAGGCTGAAAGGGAGAAAATGAAACGTGAACATTTGAATGAACTCTTTCTTGATCTTGCCAGTGCACTTGATGTAAATGAGAACAATGGAAAGGCTTCTATATTGTGTGAAGCTTCTAGGTTGCTAAAAGACTTGCTCTCTCAGATCGAGTCCCTCAAGAAAGAGAACGTCACACTGTTGTCTGAATCGCATTATGTGACTATGGAGAAAAATGAGCTGAAGGAGGAGAATTGTAGCCTAGAAACTCAAATTGAGAAACTTCAAGGAGAGATACAGGCAAGAGTTGCTCAATCTAAACCTGACCTGAATGTACCACATTCGGAACTTGAGCCACTGGAGCAGTCAAATTTCCTAGGACAGAGTCTCCAATTGCCTACCATGGAACCTAACTTGCAGCAAGGATCTGCAGTTTTGCTTGTCCCTTTTCGTCCTGATCTTCAAGCTTCTTTTCCAGCTCCTAATGTTAACGAAGTCGCGCCAAATTCTATTTCTGTTGTCAGTAAACCGCATGCTAGGTATCCCACAGCAGCAGATTCATGGCCATCCCAGCTGCTTGGATAG 849 0.437 MCPSATLHRHNPILFSLSSALILIFQLLFTPNSILLFHCSNSIPVQSPPPLGNFEILLLEGFAHMGSESVAPAVETSKSRSSSGKMNQGKVPRKIHKAEREKMKREHLNELFLDLASALDVNENNGKASILCEASRLLKDLLSQIESLKKENVTLLSESHYVTMEKNELKEENCSLETQIEKLQGEIQARVAQSKPDLNVPHSELEPLEQSNFLGQSLQLPTMEPNLQQGSAVLLVPFRPDLQASFPAPNVNEVAPNSISVVSKPHARYPTAADSWPSQLLG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01328 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 92 141 IPR011598 GO:0046983
Phco8g01328 282 MobiDBLite consensus disorder prediction 73 88 - -
Phco8g01328 282 Coils Coil 166 186 - -
Phco8g01328 282 CDD bHLH_AtILR3_like 97 170 - -
Phco8g01328 282 Gene3D - 84 158 IPR036638 GO:0046983
Phco8g01328 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 93 168 IPR036638 GO:0046983
Phco8g01328 282 Coils Coil 138 158 - -
Phco8g01328 282 PANTHER TRANSCRIPTION FACTOR BHLH47 69 281 - -
Phco8g01328 282 MobiDBLite consensus disorder prediction 73 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01328 Phco-Chr8 13846870 13849140 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01328 8 13846870 13849140 Phco8g01328 8 13846870 13849140 ECH