Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco8g01320 | ATGCTGTGGAATGCTGTCATATTTGGTCCTGATGATACTCCATGGGACGGAGGCACGTTTAAGTTGACTCTCCAGTTTACTGAGGATTATCCTAACAAGCCACCAACTGTACGATTTGTCTCTCGAATGTTTCATCCAAACATTTATGCGGATGGAAGTATTTGTTTGGATATATTACAAAATCAATGGAGTCCTATATACGATGTAGCTGCAATACTCACTTCTATCCAGTCATTACTTTGTGATCCCAACCCAAATTCTCCTGCAAATTCAGAAGCAGCTCGAACGTTTAGTGCAAACAAGCGCGAGTACAATAGACGAGTTAGAGAAATTGTGGAGCAAAGTTGGACAGCTGACTAA | 360 | 0.4111 | MLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARTFSANKREYNRRVREIVEQSWTAD | 119 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco8g01320 | 119 | PANTHER | UBIQUITIN-CONJUGATING ENZYME E2 | 1 | 116 | - | - | |
| Phco8g01320 | 119 | SUPERFAMILY | UBC-like | 1 | 117 | IPR016135 | - | |
| Phco8g01320 | 119 | SMART | ubc_7 | 1 | 117 | - | - | |
| Phco8g01320 | 119 | Pfam | Ubiquitin-conjugating enzyme | 2 | 111 | IPR000608 | - | |
| Phco8g01320 | 119 | Gene3D | Ubiquitin Conjugating Enzyme | 1 | 119 | IPR016135 | - | |
| Phco8g01320 | 119 | ProSitePatterns | Ubiquitin-conjugating (UBC) active site signature. | 44 | 59 | IPR023313 | - | |
| Phco8g01320 | 119 | CDD | UBCc | 1 | 112 | IPR000608 | - | |
| Phco8g01320 | 119 | ProSiteProfiles | Ubiquitin-conjugating (UBC) core domain profile. | 1 | 117 | IPR000608 | - | |
| Phco8g01320 | 119 | FunFam | Ubiquitin-conjugating enzyme E2 2 | 4 | 119 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco8g01320 | Phco-Chr8 | 13754175 | 13756855 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco8g01320 | 8 | 13754175 | 13756855 | Phco8g01320 | 8 | 13754175 | 13756855 | ECH |