Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01293 ATGGGGCACAAAAAGAGAAACTCTGCGCCGCGCTCGAAACCACCCGCGGCGGCTTCTCCGGCGGTGCAATCCGGCGTCGGCGGAGCCGCCAACGGTTCCTCCTCGCCGGACGCTGACGCTAGCAATGTTTCCGATCACAAACCACATAACCCTAGCAAGATCGAATTGGCTCCGCCCCAATCCGAGGGTTCCGATTACTCCACAATCAAGCTCGAATGCGAGCGCGCCCTCACCACGCTTCGCCGCGGGAACCACAACAAGGCAATGAAGCTGTTGCGGGAGATTTGCTCCAGAGAGGAGGGTTCGCCTCACTCCGCTTTCGTCCACCGAGTTCACAGCCTCATGTGTTTCAAAACGGCGACGGTTATCACCGACCCGAGCTCGAAACAGCGGCATTTGAAGAACGCGCTCGAGTCGGCGCGCCACGCGGTGGAGCTCATGCCAAATTCCGTTGAGTACGCGCATTTCCGTGCCACGGTGATGTTGGAAGCTGCAAGTGAAGGGAAGGATTACGAGGATGTGGTGCATGAGTGCGAGAGGGGGCTCGCTATCGAGAACCCCAGTGATCCTGCCAAGGAGACGTTGCAGGATGAGAGCGAGCAGAAAGCATTATCTACTGAGGAACGTATTGCGCACGTGCAGAATGAGTTGAGGCAGGTTATTCAGAAGTCGAATATAGCTTCCTTGTCTTCTTGGATGAAGAATTTGAATAACGGGGAGGAGAGGTTTCGGTTGATTCCGATAAGGAGGACCCCAGAGGACCCCATGGAGGTGAGGCTGGTTCAGACTAGAAGGCCTAATGAGATCAAGAAGGTGACCAAGACGCCCGAGGAAAGACGGAAGGAAATTGAAGTGCGAGTGGCTGCTGCCAGGCTGTTGCAACAGAAGTCAGAGGCACCACAATCTCCGAATGAAGGAGATAGGGATGACAGACCATTGGATTCATCTGCAGGATCTGGTCAGAGGATTGGTGATAGGAGAAGGCATGGAAATGTGAGGAAGAGTGGTTTTACAGCGGAAAGGATGAAATGGGTGCACTCCTATTGGAATTCGGTTAGCATGGATAGGAAGAAGGACTTTCTGAGGGTTAAAATTTGTGATCTTAAGTCACACTATGGGTCTTCGAAGGATACTTTGCCGAATGATATCTTGTCAGAGGCTTTGTCTTATGCTGAGGCCAATAAAACTTGGAAATTCTGGCCTTGCTGCAACTGTGAAGAGAAACATTACAACCCGGATTCTCATAGGCATCATGTTGTGCAGGAGCATATGGGGAGTCTGTCGCCACAAATGCAGAGACTTCTGCCCCAAAATGTGGATAGTGAATGGATTGAGATGATTCTTAATTGTTCTTGGAAGCCTCTGGATGTCTTAGCTGCAGTTAGAATGCTTGATAATAAAGCAAGGTTCAATAGTCCATCACTTCCTGAGGATTTATACTTGGATAATCATACTCTGGACTATAATGTTTGTTTTAAAGAAGCAAGCAGCTCTTACATTGAGAAGGAAAGTTCAGGGGACACTCTTCGTAATTGTTTGGAAGAATGCAATAACCATTGTAAAATTATAGAAAATGATGTAAGAGAAGGTGTTGAAGACCAACTATCTGTGGCTGATCGCATTATTGATTGTTGGCCAGTATCTGATGATCCTGAGCGTGCAAAACTTCTGGGGAAGATTCATGCCATGTTTGAGACTCTTATTAGGCACAAATGTCTTGCTGCTAGTCATCTGAACAAGGTCATACAATTTACTATGGGTGAGATACAGGGTTTCGCTGCTGGTTCTCAACTTCTAAATCATGGCGTGGATCAAACACCAATGTGCATATGCTTTCTAGGACCTTCACAGCTTAAGACAATCTTCCAATTTCTGCAGGAAATATCTCACGCATGTGGGTTGGCCAGAAATGGTGATAAAGGTAGTAGTCCCACAAATGATTTGCTGAATATCTGTCAAGGTCCCGAGATTAAAGACAAGATTGTACTCGACGGAGATGCATCACGACTCCTACTGGATGAGTGTTTACTGCAAACACAAGTCACTGCTGGTACAAATCAGGGGTCTGTCTTGGATGATGTGACCACCCCAAGGTCTCCTGATGGAATTTCATGCTATAACGCTGCTTTGCTATCCTGGATATTTTCAAGTTCCCCTATTGGGGATCAAGTGACATCATGGCTGCGGATCAGAGAAGATAAAATAAATAAAGGAAAGGAAATTGTCCAGATGCTTGAGAAGGAGTTTTATCACCTACAGGGCCTATGTGAGAAAAAGGGTGAGCGTTTAAGTTATGAGGAAGCGCTGCAAACTGTAGAGGATCTATGTCTTGAAGAAGGTAAGAAGAGGGAAACTGTTGGGGAATTTGTTCAGCGAAGCTATGAATCTGTCTTGAGAAAGCGCAGAGAAGAGCTCATCGAGAGTGAGAATGATATGATGTATGTCAGCAATAGGTCTGAGTTGGATGCTATATCAAATGTTTTGCAAGAAGCAGAAGCAAGGAATGTCAATCAATTTGGTTATGAGGAAACTTATGCTGGTGTAACTTCTCAATTATGTGACTTAGAATCTGGTGAAGAAGATGAATGGAGAATGAAGGACTACTTGCACCAAATGGATGGCTGTATAGAAAATGCTATTCAGAAACTGAAGGAGCATTTATCTATAGAGCTTAGCAAAATTGATGCCCGAATAATTAGAAGTGTCACAGAGATGCAACAATTGGAATTCAAGCTTGGGCCTATTTCTGCTAATGATTATCGAGCAATATTGGTGCCTCTAGTGAAGTCGTACCTAAGGGCACTTTTGGAAGATTTGGCCGAGAAGGATGCAAGAGAGAAGTCTGATGCTGCAAGTGAAGCATTTTTGGCTGAACTTGCTCTAGATTCCAAGAAGGCTGTTAAAGGCGGAAGTGAGAGCACAAAACATGTCGAGAAAACAAAAGATAGGAAGAAGAATAAAGATCACAGAAAAGCAAGAGATATGAAGGCCACGGGTGATCATGTGCAGTTCTCAGTGGGATCTACAATTCCCGATTCCAATCTAGTTGCACCTGAAAGTGACTTCCTAGATCATGAGGTTGGTTCTATGAATGATGATGACTTAGAACAACTTGAAGAGGAATTTAGACGGAAAATTGAGCTAGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAGTTCCAGCGAAGGATAGAAAATGAAGCCAAACAGAGGCATCTTGCAGAGCAACAAAAAAAGTCATCTGGGTTGTACTTAGAAGTGGAAGAAGATCTTCAAGATTGTCAAACAAAGGCAGATACTGATTCGCTAGATTCATACAAACACGTAAGAGAAACTGTGCAAGACCTGTTGGTACAGGATAATGGATCCCGAAGCAATCTGGATGGTGTTCAAACAACCACAACAAATGGTTCCATTTATTTGCATCAGTCAAAAGTTAAACAATCAGATTTGCCTAATGGAGTTGTTCGAGAGAATGGTCTACCTGTGTCTGATCGGCGTGCTGGAAAAAAACATAAACGGAGAAATTCTTCCAGACCACTCGATGGAAAGATTGAATCTTTTTCTTCAGAAAAAGAGAATACGGAGGATACACATACTGATTCTCATTTGAGAGAGAAATCCAAATTTAATAACAGTCAGGACAATAATAATGTGTGGAAAAACAATGGATCAAATGTGATGAGAGAGTTGCCAGTAGAAGATGCAGAGGAGGAAAGATTCCAGGCTGATCTTAAAATTGCTGTGCGCCAAAGCCTGGACACGTTTCAAGCCCGGGGAAGTTTGTCTTTGGCTTCCAGTTTAAGGATGTCCCAGAGGGCTTCTTCAGTGGTAGATAGTGTTGATTGCTTGCCTGTAGAAGACCCAACAGATAATGTGAATGGGGCAACTTTGTTTGGTACTGGATTGAAGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATTTAAGACGCTTTCGAGTGGAATTTCTTGGCAGATCAAGAACAGAGCATGGCCATGTGGGCAATCCTTGCGTTGTGTGTGCATTGTACGAAATCTTTACTGCACTGGACATCGCATCTAAGGATTCAAGGAAAGAAGCAGTTGCACCTACATCACTGCGGATTGCTCTAAGTAATCTGTATCCTCACAGTAGTTTCTTCCAGGAGGCCCAGATGAATGATGCTTCTGAGGTACTGGCAGTGATATTTGACTGCCTTCATCGATCATTTACTCGTGGTTCAAGTGTTTCTGATGCAGAATCAGCTGAAACTAACTGCATGGGATCCTGGGATTGTGCAAATAGTAGTTGTATAGCACATTCACTTTTTGGAATGAACATTTTTGAACAAATGAACTGCTATCACTGTGGTCTTGAATCCAGACATATGAAATATACTTCCTTCTTTCACAATATAAATGCCAGTGCCCTCCGTGATATGAAGGAAAAGTCTCCTGCAAGTTTCTTCGATAATCTTTTGAATCTTGTGGAGATGAACCATCAGTTGGCTTGCGATCCAGAAGCTGATGGCTGTGGCAAGCTGAACCACATCCATCACTTTCTCTCAACTCCACCCCATGTTTTTATGACAGTCCTAGGTTGGCAAAATACATGTGAGAGTGCTGATGATATAACCGCAACTCTGGCTGCCCTGAGCACCACAATCAATATCAGTGTCCTTTATGGTGGTTTAAATCTTGAATGCACCCATAACTTGGTGTCAGTGGTTTGCTACTATGGTCAGCACTACCATTGCTTTGCTTACAGCCGTGACCATGAACAATGGATTATGTACGATGACAAGACTGTCAAGGTAATTGGTGGATGGGGAGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAA 4908 0.4415 MGHKKRNSAPRSKPPAAASPAVQSGVGGAANGSSSPDADASNVSDHKPHNPSKIELAPPQSEGSDYSTIKLECERALTTLRRGNHNKAMKLLREICSREEGSPHSAFVHRVHSLMCFKTATVITDPSSKQRHLKNALESARHAVELMPNSVEYAHFRATVMLEAASEGKDYEDVVHECERGLAIENPSDPAKETLQDESEQKALSTEERIAHVQNELRQVIQKSNIASLSSWMKNLNNGEERFRLIPIRRTPEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSEAPQSPNEGDRDDRPLDSSAGSGQRIGDRRRHGNVRKSGFTAERMKWVHSYWNSVSMDRKKDFLRVKICDLKSHYGSSKDTLPNDILSEALSYAEANKTWKFWPCCNCEEKHYNPDSHRHHVVQEHMGSLSPQMQRLLPQNVDSEWIEMILNCSWKPLDVLAAVRMLDNKARFNSPSLPEDLYLDNHTLDYNVCFKEASSSYIEKESSGDTLRNCLEECNNHCKIIENDVREGVEDQLSVADRIIDCWPVSDDPERAKLLGKIHAMFETLIRHKCLAASHLNKVIQFTMGEIQGFAAGSQLLNHGVDQTPMCICFLGPSQLKTIFQFLQEISHACGLARNGDKGSSPTNDLLNICQGPEIKDKIVLDGDASRLLLDECLLQTQVTAGTNQGSVLDDVTTPRSPDGISCYNAALLSWIFSSSPIGDQVTSWLRIREDKINKGKEIVQMLEKEFYHLQGLCEKKGERLSYEEALQTVEDLCLEEGKKRETVGEFVQRSYESVLRKRREELIESENDMMYVSNRSELDAISNVLQEAEARNVNQFGYEETYAGVTSQLCDLESGEEDEWRMKDYLHQMDGCIENAIQKLKEHLSIELSKIDARIIRSVTEMQQLEFKLGPISANDYRAILVPLVKSYLRALLEDLAEKDAREKSDAASEAFLAELALDSKKAVKGGSESTKHVEKTKDRKKNKDHRKARDMKATGDHVQFSVGSTIPDSNLVAPESDFLDHEVGSMNDDDLEQLEEEFRRKIELEEEEKKLEETLEFQRRIENEAKQRHLAEQQKKSSGLYLEVEEDLQDCQTKADTDSLDSYKHVRETVQDLLVQDNGSRSNLDGVQTTTTNGSIYLHQSKVKQSDLPNGVVRENGLPVSDRRAGKKHKRRNSSRPLDGKIESFSSEKENTEDTHTDSHLREKSKFNNSQDNNNVWKNNGSNVMRELPVEDAEEERFQADLKIAVRQSLDTFQARGSLSLASSLRMSQRASSVVDSVDCLPVEDPTDNVNGATLFGTGLKNEVGEYNCFLNVIIQSLWHLRRFRVEFLGRSRTEHGHVGNPCVVCALYEIFTALDIASKDSRKEAVAPTSLRIALSNLYPHSSFFQEAQMNDASEVLAVIFDCLHRSFTRGSSVSDAESAETNCMGSWDCANSSCIAHSLFGMNIFEQMNCYHCGLESRHMKYTSFFHNINASALRDMKEKSPASFFDNLLNLVEMNHQLACDPEADGCGKLNHIHHFLSTPPHVFMTVLGWQNTCESADDITATLAALSTTINISVLYGGLNLECTHNLVSVVCYYGQHYHCFAYSRDHEQWIMYDDKTVKVIGGWGDVLTMCERGHLQPQVLFFEAVN 1635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01293 1635 Pfam Protein of unknown function (DUF627) 75 186 IPR006866 -
Phco8g01293 1635 MobiDBLite consensus disorder prediction 292 334 - -
Phco8g01293 1635 Pfam Ubiquitin carboxyl-terminal hydrolase 1303 1610 IPR001394 GO:0004843|GO:0016579
Phco8g01293 1635 Gene3D Cysteine proteinases 1293 1633 - -
Phco8g01293 1635 MobiDBLite consensus disorder prediction 1 66 - -
Phco8g01293 1635 MobiDBLite consensus disorder prediction 1180 1211 - -
Phco8g01293 1635 Pfam Protein of unknown function (DUF629) 345 878 IPR006865 -
Phco8g01293 1635 CDD Peptidase_C19 1393 1632 - -
Phco8g01293 1635 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1302 1634 IPR028889 -
Phco8g01293 1635 MobiDBLite consensus disorder prediction 302 334 - -
Phco8g01293 1635 Coils Coil 196 223 - -
Phco8g01293 1635 MobiDBLite consensus disorder prediction 26 41 - -
Phco8g01293 1635 MobiDBLite consensus disorder prediction 967 998 - -
Phco8g01293 1635 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1634 - -
Phco8g01293 1635 MobiDBLite consensus disorder prediction 1142 1225 - -
Phco8g01293 1635 Coils Coil 1031 1072 - -
Phco8g01293 1635 SUPERFAMILY Cysteine proteinases 1302 1632 IPR038765 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01293 8 13541165 13548698 Phco8g01293 8 13541165 13548698 ECH