Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01289 ATGAAGGTTGTTTTTCCCTTCAGCTTCTTGCTTTGTTGCTTCTTCTTGCTGCTTTTGGATTCTTCAACTGCACTTCCTCTATGCCTTCACTTAGAGCGACCATTTACCATCAATACCACGATCGGGTTTTGCCCTTACAATGGCAGCACGTGTTGCCATTCCACAGAAGACGAAGGGATACAGAAGCAATTCCAACTGATGAATGCATCTGATCCTGGCTGTGCCTCCATTTTGAAATCTATACTTTGTGCGAGATGCGACCCTTTTTCTGCGGAGCTATTTACAGTTCAATCCACTCCCAGATCAGTTCCCGTGCTTTGCAATTCGACCATCCCTGGAAATTCTTCTCAGTCAAAAGCAGCAGTGCAGGACTTCTGCTCTGAAGTATGGGACACATGCCAAGCTGTGTCAATTATAAACTCACCATTTTCCCCTTCATTACAGGGCCAAGCAGGAGGAACACCGGGTAATAATGCCAATGCAACCAAACTAACTGAATTATGGCAATCAAAAACAGATTTTTGTAATGCATTTGGTGGAGCCTCCAATAGTGAATCAGTTTGCTTTGAGGGGGAACCTGTTGAACTAAACAACACTCAAACTCCTATGAACACCCCTCATGGTTTGTGCCTTGAGAAAGTTGGGAGTGAACCTTATCTCAATATGGTTGCTCACCCTGATGGCTCTAACCGCGCATTCTTCTCTAGTCAAATGGGTAAGGTTTGGCTGGCAATTATTCCTGATGAGGGATCAGGAGGACAATTGGAACTTGATGTGTCAAGTCCCTTTGTTGATCTAACCGACCAAGTTTATTCTGATACTCAACTTGGAATGATGGGAATGGCATTTCATCCAAACTTTACAAACAATGGTCGATTCTTTGCTTCATTTAACTGTGATAAGGATCAGTGGTCTGGATGTAACGGAGTATGTTCTTGTAATTCAAATGTTGATTGTGATCCATCAAAGATAGGAAATGAGAATGGTGTTCAACCATGTCAGTATCAAGCTGTTATTGCAGAATATACTGCAAATGGTACTGCATCTCCGCCATCATCGTTAAGTGCTAAACCAGTAGAAGTGAGAAGGATATTTACCATGGGCCTCCCTTTTATATCTCAACATGGAGGCCAAATACTCTTCGGACCTAATGATGGATATTTATACTTCATGATGGGAGATGGTGGAGGCTCAGGTGATCCATACAACTTTGCCCAAAACAAGAAATCTTTGCTTGGAAAGATTATGAGGCTTGATATAAACAACATTCCAAGTGCATCAGAAATCAGCAAACTTGGCCTTTGGGGTAGCTACTCCATTCCTAAGGATAATCCGTTCAGTGAAGATAAAGATCTGCAACCTGAAATATGGGCCTTGGGATTAAGAAATCCATGGCGATGCAGTTTTGATTCAGAAAGACCTTCCTACTTTTTTTGTGCAGACGCTGGACAGGATCTTTATGAGGAGGTGGATCTCATCACAAAGGGTGGAAACTATGGTTGGCGTGTTTATGAGGGACCCTATCTTTTCACTCCTACGGAGTCACCTGGTGGCAACACCTCCCTCAACTCCATCAATCCAATTCCCCCAATATCTGGATACAACCATTCTGAAGTTAACAAGAATGAAGAATCTGCATCTGTCACTGGTGGATATGTCTATCGCTCTAGGACTGATCCTTGCATGTATGGAAGGTACTTGTACACTGATCTCTATGCTGGTGCAATATGGACAGCCATTGAAGATCCCCAAAACAGTGGAAATTTCAGCACCACCAGAATACCTTTCAGTTGTGCACATGACTCTCCTATCCAATGTGACTCAGTCCCTGGAAGCTCCCTTCCAGCTCTGGGCTACATTTATTCATTCGGTGAAGACAATAACAAAGGTGTTTATATTCTTGCAAGCACTGGTGTTTACCGTGTTGCCCGTCCAAGCCGCTGCAATTACACTTGTTCACTGGAAAAGGCAACGACCACTCCTCCTTCTTCCCCTAATCCATCTCATTCAAGCTGTTGTAGTAAATTCTTCTCCGGATATCTGTTTCTGCATCTTTCATCCTTTTTGTTGCTTTACATAGATTTTGTGTAG 2091 0.4304 MKVVFPFSFLLCCFFLLLLDSSTALPLCLHLERPFTINTTIGFCPYNGSTCCHSTEDEGIQKQFQLMNASDPGCASILKSILCARCDPFSAELFTVQSTPRSVPVLCNSTIPGNSSQSKAAVQDFCSEVWDTCQAVSIINSPFSPSLQGQAGGTPGNNANATKLTELWQSKTDFCNAFGGASNSESVCFEGEPVELNNTQTPMNTPHGLCLEKVGSEPYLNMVAHPDGSNRAFFSSQMGKVWLAIIPDEGSGGQLELDVSSPFVDLTDQVYSDTQLGMMGMAFHPNFTNNGRFFASFNCDKDQWSGCNGVCSCNSNVDCDPSKIGNENGVQPCQYQAVIAEYTANGTASPPSSLSAKPVEVRRIFTMGLPFISQHGGQILFGPNDGYLYFMMGDGGGSGDPYNFAQNKKSLLGKIMRLDINNIPSASEISKLGLWGSYSIPKDNPFSEDKDLQPEIWALGLRNPWRCSFDSERPSYFFCADAGQDLYEEVDLITKGGNYGWRVYEGPYLFTPTESPGGNTSLNSINPIPPISGYNHSEVNKNEESASVTGGYVYRSRTDPCMYGRYLYTDLYAGAIWTAIEDPQNSGNFSTTRIPFSCAHDSPIQCDSVPGSSLPALGYIYSFGEDNNKGVYILASTGVYRVARPSRCNYTCSLEKATTTPPSSPNPSHSSCCSKFFSGYLFLHLSSFLLLYIDFV 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01289 696 FunFam HHIP-like 1 213 637 - -
Phco8g01289 696 Gene3D - 215 614 IPR011042 -
Phco8g01289 696 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 214 577 IPR011041 -
Phco8g01289 696 Pfam Glucose / Sorbosone dehydrogenase 262 506 IPR012938 -
Phco8g01289 696 PANTHER HEDGEHOG-INTERACTING PROTEIN 57 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01289 Phco-Chr8 13502603 13505962 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01289 8 13502603 13505962 Phco8g01289 8 13502603 13505962 ECH
Phco8g01289 8 13502603 13505962 Phco7g02204 7 38919226 38923570 PCT