Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01272 ATGGTTTCCGATTCAATCTCTGCCGTGCCGATTCCCTCCGCCGCAAACACTAAGAACCCCGGGAAGAAGAAGAGGACTAACAGGTCTGCAAAATTGAAGCAATATAAAATCGATGCGCGCCGCGAACAGTGGCTATCGCAAGGTGCGGTGAAGAGTAAGGGATGCAAGGACGGTGTGGACGATGACATCGTTCGCGCGCCGCCGCCGGCTGTAAATCACGGCAAGCTCTCGTTGGAGCCTCTTAACACGAGGCGCGAAGGCGATGAGGACGATGGATTGATCCATCATGACAGCGATTCGGAGTCTCCTACCAACTGTCCCGCCGGCGTGTTGTGCGGCAACGATTCGGGGACGAATTTCACCGGCAGCAGTAGCGGCGGGAGCAGCAGCAGCAGCAGTACAAGCAGCGGCGGGTGCTGTTCCGGGAACATTACCGAGGAGGAGGAGGAAGAAGAAGGTGAGGACGACGATGATGGTTGCTTGGATGATTGGGAGGCCATGGCAGATGCTTTAGCCGCCGATGACAAGCAGGAAAACCCTTGTTCTGATTCACCCCCAGTGGTTTTGCCTCGTGAAGGGTCCAATTTAGGGTCTCCGAATTCAAAACCAGAGAGTAGTAGATTGGTTCCTTGGGGCTCTGGTAGTAGCCGAGCGTGGAGGGCAGATGACGCCTTTCGCCCTCAGAGTTTGCCCAATTTGTCTAAGCAGCACAGTATGCCGAACCCTGATCGGCGCTGCGTAGGAGGGGTCCCTTGGGGTCGTGTCTCCACGCCGTCCCCGTGTCCTATTTGCTGTGAGGATCTGGATTTGACGGACACGAGTTTCGTGCCTTGTTTCTGTGGGTTTCGGCTTTGCCTCTTTTGCCACAAGAGGATTCTGGAGGAGGATGGGCGTTGTCCCGGGTGTAGGAAGCCTTATGAGTGTGAACCTGTTGAGACAGAGGCGAGTGTGCATGGAGGCAGCCTCACTCTTCGGTTGGCACGTTCCTGCAGCATGATCGAGAGGTCTTGA 1011 0.5589 MVSDSISAVPIPSAANTKNPGKKKRTNRSAKLKQYKIDARREQWLSQGAVKSKGCKDGVDDDIVRAPPPAVNHGKLSLEPLNTRREGDEDDGLIHHDSDSESPTNCPAGVLCGNDSGTNFTGSSSGGSSSSSSTSSGGCCSGNITEEEEEEEGEDDDDGCLDDWEAMADALAADDKQENPCSDSPPVVLPREGSNLGSPNSKPESSRLVPWGSGSSRAWRADDAFRPQSLPNLSKQHSMPNPDRRCVGGVPWGRVSTPSPCPICCEDLDLTDTSFVPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECEPVETEASVHGGSLTLRLARSCSMIERS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01272 336 FunFam RING/U-box superfamily protein 254 319 - -
Phco8g01272 336 MobiDBLite consensus disorder prediction 144 164 - -
Phco8g01272 336 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 257 333 IPR039780 GO:0004842|GO:0030014
Phco8g01272 336 MobiDBLite consensus disorder prediction 1 214 - -
Phco8g01272 336 MobiDBLite consensus disorder prediction 79 98 - -
Phco8g01272 336 Pfam RING/Ubox like zinc-binding domain 261 307 - -
Phco8g01272 336 ProSiteProfiles Zinc finger RING-type profile. 261 303 IPR001841 -
Phco8g01272 336 CDD mRING-HC-C4C4_CNOT4 261 304 IPR039515 -
Phco8g01272 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 318 IPR013083 -
Phco8g01272 336 SUPERFAMILY RING/U-box 257 312 - -
Phco8g01272 336 MobiDBLite consensus disorder prediction 194 212 - -
Phco8g01272 336 MobiDBLite consensus disorder prediction 99 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01272 Phco-Chr8 13308450 13309652 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01272 8 13308450 13309652 Phco8g01272 8 13308450 13309652 ECH