Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01260 ATGTGTCCTCCTCGACATTACACAACATGTCTTCTTCTTCTTCTTCTTCTCTTCCTCGTACTTTCCGACTTCTCCATATCCCAATCACAATCCCCTTCGGCTGCCAAGAGAAAACGCATGAAAGAGAAAGTTCGCAATATGTTTTACCACGCATATGACAACTATATGACTTATGCCTTTCCGCATGATGAGCTTAAACCTCTCTCAAAAACTTTCACCAACTCCCTAAGTGAGTTGGGGAATTTGAAGCTTGAACACTTGCCTCAAGACTATCATGGCTCTGCCCTTACACTTATTGAATCGCTGTCTAGCCTTGTTATTATGGGAAATAGCACTGAATTTGAGAGGGCAGTGCTTTGGCTTTCAGAAAATCTGACATTTGATGTTGATGCACGCATAAATCTTTTTGAGTGCAACATAAGAGTTCTGGGAGGACTTGTCTCAGCTCATTTACTTGCATCTGATTCTTCGAAGAAGTTGTTTGAAGGGGCTTACAACAATCAGCTGCTAGTTCTGGCTGAAGATTTAGGGAAACGCTTTCTACCAGCATTTAATACGCCTACTGGATTGCCGTATGCATGGATTAACTTAAAGTATGGAGTAATGGAGAATGAGACTACAGAAACAAGTACTTCAGGGTGTGGTTCTCTTATTCTTGAAATGGGTGCTTTATCAAAAATGACTGGTGACCCCATATATGAATCAGCAGCGTTACGAGCTCTTCGCAAGCTATGGAGTATGCAGAGCTCATTAAAATTATTTGGAACCACACTGGACGTGGCAACTGGGCAATGGATTGAATATTCATCAGGAATTGGAGCTGGGGTTGATTCCTTCTACGAGTATCTACTCAAAGCCCATATCCTTTTTGGGAAGGAGGACTTTTGGAAAATGTTTCACTCTGCTTATGTTGCCGTGCAGAAATATTTCAGACACGGTTCTTGGTACCATGAAGCTGATATGAGGACTGGAAGAGCAACTTATTGGCAGCTTACAAGCCTTCAAGCATTTTGGCCTGGCCTACAGGTTCTTATTGGGGATCTTAGCGCTGCTAATTCATCTCACCGTGAGTTCTTCCATGTGTGGAAGAGATACGGAGTGCTACCAGAGAGGTATTTGCTGGACCACCAGATGATTCATCCTACTGAAAAATATTATCCCTTACGTCCTGAATTGGCTGAGTCAACCTTCTACTTATATCAAGCCACTAAAGATCCATGGTATATTGAAGTTGGTGAATCAATAGTCAATTCCATTAATTTATACACCAAAGTTGAAGGTGGGTTTGCAAGCATTAAGGACGTGACAACTATGCAGTTGGAAGATCATCAGCATAGTTTTTTTCTTGCTGAGACGTGCAAATATTTATATCTTCTATTTGACGATTCGTTTGTACATGAGAATAATTATGTATTTACCACTGAAGGTCATCCTCTTCCAGTACTCAGCAACTGGCATGAAGAGCTTCCACAAGCTTATGTTCCAACTAATTGGACTTTTGTGAAGAGGCAACCAAGAGTGAACCGAATCAGCGCAATGTCTCTGCAAGTATGTCCTGCTTTGAATTTAAAGTCAGGTCAACATATTGAGAGTGCTTGCCACATCCCTGATGCTCGTAGTGACTTCAGGTGTTTGACCGATGAAGATTGTGGAGTTGATGCCACTACATGCAGAAGAAGATCATGCAGCATGGCTGGTTATTGTGGGTTATGGCTCATCATATGA 1725 0.418 MCPPRHYTTCLLLLLLLFLVLSDFSISQSQSPSAAKRKRMKEKVRNMFYHAYDNYMTYAFPHDELKPLSKTFTNSLSELGNLKLEHLPQDYHGSALTLIESLSSLVIMGNSTEFERAVLWLSENLTFDVDARINLFECNIRVLGGLVSAHLLASDSSKKLFEGAYNNQLLVLAEDLGKRFLPAFNTPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSKMTGDPIYESAALRALRKLWSMQSSLKLFGTTLDVATGQWIEYSSGIGAGVDSFYEYLLKAHILFGKEDFWKMFHSAYVAVQKYFRHGSWYHEADMRTGRATYWQLTSLQAFWPGLQVLIGDLSAANSSHREFFHVWKRYGVLPERYLLDHQMIHPTEKYYPLRPELAESTFYLYQATKDPWYIEVGESIVNSINLYTKVEGGFASIKDVTTMQLEDHQHSFFLAETCKYLYLLFDDSFVHENNYVFTTEGHPLPVLSNWHEELPQAYVPTNWTFVKRQPRVNRISAMSLQVCPALNLKSGQHIESACHIPDARSDFRCLTDEDCGVDATTCRRRSCSMAGYCGLWLII 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01260 574 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 11 488 IPR044674 GO:0004571|GO:1904380|GO:1904382
Phco8g01260 574 Pfam Glycosyl hydrolase family 47 47 480 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phco8g01260 574 PRINTS Glycosyl hydrolase family 47 signature 273 290 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phco8g01260 574 PRINTS Glycosyl hydrolase family 47 signature 47 67 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phco8g01260 574 PRINTS Glycosyl hydrolase family 47 signature 182 201 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phco8g01260 574 PRINTS Glycosyl hydrolase family 47 signature 132 150 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phco8g01260 574 PRINTS Glycosyl hydrolase family 47 signature 387 411 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phco8g01260 574 PRINTS Glycosyl hydrolase family 47 signature 446 466 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phco8g01260 574 PRINTS Glycosyl hydrolase family 47 signature 330 346 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phco8g01260 574 SUPERFAMILY Seven-hairpin glycosidases 37 491 IPR036026 GO:0004571|GO:0005509|GO:0016020
Phco8g01260 574 Gene3D - 29 491 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01260 Phco-Chr8 13185242 13194030 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01260 8 13185242 13194030 Phco8g01260 8 13185242 13194030 ECH