Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01257 ATGTCGCTCAAGCGCCGTCCCGATGATGGCAAGACTCCAGACGACAAGCGGAGGAAGCCGCCTCCTTTCACCAGTGTGGTGCGTGACGTGATGAGATTACAATCACTCGGGCATTTGCTGGAGCCAATTCTTGAGCCATTGGTTCGCAAAGTGGTTAAGGAAGAAGTTGAGGCAGCCCTAAAGAGGCATTTAACCAGCGTGAAACAGACCTGTGGAAAGGAGTTGCATACTACTGAATTAAGAAATTTGCAACTGCAGTTTGAAAACAGCATTTCTCTGCCTGTCTTTACTGGTGGTCGGATTGAAGGAGAGGATGGCTCTAACCTAAGAATAAGTTTAGTTGATGGTCTAACAGGGGAGGTTGTCTGTACAGGACCTGAATCGATGGCTAAGGTGGAAATTGTAGTTCTTGAGGGTGATTTTGAAGAAGAAAGTGATATTTGGATGCCCGAAGAGTTCAAGAGCAATATCGTGAGAGAGAGGGAAGGAAAAAAGCCCCTTCTTACAGGAGATGTAATTTTATATCTTAAAGATGGTGTTGGTATGATGGGTGAAATTTCGTATACAGATAATTCAAGCTGGACACGGAGTCGCAGGTTCAGGCTTGGGGCAAGAGTTGTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTTATTGTCAGAGATCACAGGGGAGAATTGTATAAGAAACACCATCCTCCGAGTATGTCTGATGAAGTTTGGAGACTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAGATCCTTACTGTTAGAGAGTTTCTCACGCTTCTCAATCTGGATCCAGCAAAGCTGCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACCGTGGAGCATGCTCGAACTTGTGTACTTGATACAACTAGGCACGTGTACTTCCCCTCTAATTCTCAACAACATGGTGTGGTCTTCAATGCTGTGGGACAAGTGACTGGACTGCTTTCTGAATGCGAGTATGTCACAGTAGATAAGCTGTCTGAAACTGAAAAGGTTGAGGCTCAAAATACAATTGCTACTGCATTAAGACAAGGGGAGAAATATGCAACTTTTGAAGATGAAGATTCTCTCATGGATGGGTCTTCACACTTAACTAATGTGCTTCACTCCCCGAGCTCTCCCAAGACTGAGGGATCAAGTGCCAACAAGCTTTTGGGTCCCCAAAAGACTGGAGGATTCAATTACCCCCAAGCAAGCGCTTCTTCTCCGGATATCATGTCATCCATTTATTCTGTTGGTGGAACTAGTAGCTTGGATGACTATTGCTTGCCTAATTTCGATAGCATGGGCCTTAGATATGATCAGACCCTCAGTTTTCCAGTCCAAGTCTCTAACTCTTTGATCTGTGACACTGATTCAATGGCTCATGCTTTTAGTGATGAAGATCATCTGAAATTTTTTGATACTGATCTTCAATCTCACGTTGAAGCAGATTTACAGAGTGCTGTTGATAGCTTCATGCACGCACGTTCTACAGCCAATGGTGGTGCGCAGAGGAGATGGAGAAAGGTATGCAACGTCCTAAAATGGTTCATGGTAAGGAAACGGGGAAACCAAATACAGGTAAGGTTGTGA 1641 0.4449 MSLKRRPDDGKTPDDKRRKPPPFTSVVRDVMRLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTSVKQTCGKELHTTELRNLQLQFENSISLPVFTGGRIEGEDGSNLRISLVDGLTGEVVCTGPESMAKVEIVVLEGDFEEESDIWMPEEFKSNIVREREGKKPLLTGDVILYLKDGVGMMGEISYTDNSSWTRSRRFRLGARVVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSMSDEVWRLEKIGKDGAFHKRLSREKILTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRHVYFPSNSQQHGVVFNAVGQVTGLLSECEYVTVDKLSETEKVEAQNTIATALRQGEKYATFEDEDSLMDGSSHLTNVLHSPSSPKTEGSSANKLLGPQKTGGFNYPQASASSPDIMSSIYSVGGTSSLDDYCLPNFDSMGLRYDQTLSFPVQVSNSLICDTDSMAHAFSDEDHLKFFDTDLQSHVEADLQSAVDSFMHARSTANGGAQRRWRKVCNVLKWFMVRKRGNQIQVRL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01257 546 Pfam Calmodulin binding protein C-terminal domain 313 370 IPR046829 -
Phco8g01257 546 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
Phco8g01257 546 Pfam Calmodulin binding protein central domain 241 306 IPR046830 -
Phco8g01257 546 MobiDBLite consensus disorder prediction 1 23 - -
Phco8g01257 546 PANTHER OS02G0177800 PROTEIN 16 435 IPR012416 GO:0005516
Phco8g01257 546 MobiDBLite consensus disorder prediction 382 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01257 Phco-Chr8 13150153 13154341 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01257 8 13150153 13154341 Phco8g01257 8 13150153 13154341 ECH