Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01248 ATGGATGAAATGGGAGTTGGAGGAAGGTTGCTGAAATGGAGTCCATTTGCAGCCATGATCATGGTTGAGTGCCTTGATGTGGGACTCTCCACTTTAGGTAAAGCAGTCATGGACAGAGGAATGAACCATTTTGTCTTTGTTGTCTACTCCAACGCCATTGCTACCCTCATACTCCTCCCTCTCGCTTTCTTCATCAACAGAAGCACAAGAGCGCCCCTTTCTTTCGCTCTTCTCTGCAAGTTCTTCCTCCTGGGCACTCTTTGCATAACTGTTATGCAGAATTGTGTTTTCACCGCCATTGACTACAGCTCTCCCACTCTTGGATCCGCCATGAGCAATTTGAGTCCAGCTGTCACTTTTGTGCTAGCGGTCATCTTCGGGATGGAGAAGTTGAATATTGGAAGCTCAATAAGCCAGATCAAGGTCACGGGCACAGTGCTATCCATCTCTGGAGCATTACTGGTGACCCTTTACAAGGGTCTTGCCATCACCAGCTTTCGAATTCAACACTCTCCATCACAACCATTGTCATCTTTGTTGGCTCAAACAAGTAACTGGACCATTGGGGGTCTCTTCTTTGCGACTGCTTCTCTCTCTCTCGCACTCTCGAATATTACTCAGGCAGCAATTCTTAAAGGATATTCATCACAGTCAACCATAGTAGCCTTCTATTGCCTGTTTGGAACTATCCAAACTGCAATACTATCACTCATTGTTGTTAGGGATCCAAATGACTGGAAAATAAGCCCCGACATTGATCTCGTGTCTATATTCTATTCAGCTATTATCGGAAATGTGGTGACATTTTCAGTAGTGACTTGGTGCATAAAAAGGAAAGGACCTGTATTTGTTAGCTTGTTCAAGCCTGTGGGGATTGCCATTGCTGACTTTTCGAGCGTTATCTTCCTTGGTGAAACGCTTCATGTTGGCAGTATCCTAGGCGCAGTGATAATTGCCGTCGGATTTTACACAGTATTGTGGGCACAATCCAAAGAAGAAAACGCAAAAGGCCTCCAAGTTGATGGACAATCATTCCCATCTTCCCAAGAGAGTCCTCTACTGGAGACAATCCCGTGA 1077 0.4531 MDEMGVGGRLLKWSPFAAMIMVECLDVGLSTLGKAVMDRGMNHFVFVVYSNAIATLILLPLAFFINRSTRAPLSFALLCKFFLLGTLCITVMQNCVFTAIDYSSPTLGSAMSNLSPAVTFVLAVIFGMEKLNIGSSISQIKVTGTVLSISGALLVTLYKGLAITSFRIQHSPSQPLSSLLAQTSNWTIGGLFFATASLSLALSNITQAAILKGYSSQSTIVAFYCLFGTIQTAILSLIVVRDPNDWKISPDIDLVSIFYSAIIGNVVTFSVVTWCIKRKGPVFVSLFKPVGIAIADFSSVIFLGETLHVGSILGAVIIAVGFYTVLWAQSKEENAKGLQVDGQSFPSSQESPLLETIP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01248 358 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020
Phco8g01248 358 Pfam EamA-like transporter family 28 156 IPR000620 GO:0016020
Phco8g01248 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 159 - -
Phco8g01248 358 MobiDBLite consensus disorder prediction 339 358 - -
Phco8g01248 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 331 - -
Phco8g01248 358 PANTHER WAT1-RELATED PROTEIN 15 341 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01248 Phco-Chr8 13054643 13057309 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01475 4 13313105 13315565 Phco8g01248 8 13054643 13057309 ECH
Phco8g01248 8 13054643 13057309 Phco8g01248 8 13054643 13057309 ECH