Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01233 ATGGACGCTGTAGCAACAGGTTCGGAGCTGAACAAGTCCAGGAGCGGAGGTTCGGAGCGGAGCGATGACAGCGGAGGAGGGATATTTGAGTCCTCTGGTTGGGTTTACCACTTGGGAGTCAACTCCATTGGCCATGAGTACTGTCATCTCCGATTCCTCTTCATTAGGGGAAAGTATATCGCCATGTACAAGCGTGATCCTCACGAAAGCCCTGGCATCAAACCAATTAGGCGGGGAGTTGTTGGACCCACGCTAATGGTGGAGGAGCTAGGTCGTCGGAAGGTCAACAATGGGGATCTTTATGTTTTACGGTTTTACAATCGATTAGATGAGACCAAAAAAGGAGATATTGCTTGCGCTACAGCTGGGGAGGCTAGGGGATGGATGGAAGCATTTGACCAAGCTAAGCAACAGGCCGAGCATGAGCTGTCAAGAGGAGTTAGTGCTAGAGACAAACTAAACATGGAGACCGAGATCAATCTTGAAGGACATCGACCTAGAGTGAGGCGGTATGCCCATGGTTTGAAGAAGCTCATAAGAATTGGCCAAGGCCCAGAGAAATTGTTACGACAATCATCAAAGTTGTCTGCTAGAACAGATGGGTTTGAAGGGGACGTAGGAGATGCAGTTGAAGCACATCAATGGAAATGTGTTCTTACTTTGGCTGGTATTAGAATTTTTGAGGATGTTTCTGATAACAAGAATGGTAAGACTGTCCTTGCAAAGTCTGTTGGTGTCATTGATGCAACTGCAGATACTGTTTTTGAAGTTATTTTGAGCACTGAACAACAGAAAAGATATGAGTGGGATACATTGATATGCGACTTGGAACTTATTGATTCTTATGATGGACACTACGATGTTGTTTATGGGACATATGATTCCAAGTATCTATCTCGGTGGCACTCAAAGCAGGATTTTGTCTTCTCTAGACAATGGTTTCGTGGACAAGATGGAACATATACCATCTTGCAATGTCCAGCTGTACACAAGAAAAAGCCCCAAATACCCGGATTTCGACGTGCAAAAGTTAATCCATCTTCATGGGAGATTAGAAATTTGAACACATCTATGGCATCAAATAGCCCAAGATGTTTAGTGACCCACACTTTAGAGATAGACTCTTCATCCTGGTGTCGATGGAAGAACAACCAGAACTCAAAATTTCAGAGGAGCATTCCACATGCATTATTGTTCCAAGTGGCTGGTCTGAAGGAATACATTGCTGCCAATCCTGCACTCCACCATGAAAATGCCACCACAGTTGTTCATTCCAAAATCTCTGATGCTTCTATTTCTAGTGCTGAATGTGAGGATGAAATGCAGGATGAGTTTTATGATGCAATTACTGCTGATTCGTCAACGTCAGATGAAGAAAGTGATGACGATCAAAAACTTGTTCTGCAGGAGCCAAGAGTCAAGCTGAAGAATATTTCATGGGCAATTGCATCATTAGCTTTAAAGCGAACTGCAGCTCCTGATCTAAGCGAAGAATTGGATCCTGATGTAACTCCTATCACAATTCCAAGTAACTTGCATGGTTCTTTATGGAAAGGAAAGGATGACAATGACACAAACTGTTGGGCTTCTCCTACTGGAAAAGGATTTATGATTAGAGGAAAGAACTATCTTAAAGATAGCTCTAAGGTAGTTGGAGGAGATCCTCTTCTCAATCTTGTAGGAGTGGATTGGTTAACAGTTGATAAATCTGTAGATAGAATTGCCCTTCACCCTAAATGTTTGGTTCAGTCAGAAGCTGGGAAAAAGCTTCCATTTATCCTTGTCATCAATCTCCAGGTTCCTGCTAAGCCAAACTACAGTCTGGTTCTGTATTATGCAGCTGACAGACCTATAAATAAAAATTCTTTGTTAGCTAAGTTTGTTGGTGGAAGTGATGCGTTTCGGGACTCGAGATTCAAGCTTATTCCTAGTATAGTTGAGGGATATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTGGGAAAAGCCGTAACCTGTAAATACTTTAGACAGGATAATTTTTTGGAGATTGATGTGGACATTGGATCATCTTCTGTAGCCAGAAGTGTCATAGGCCTTGTCCTGGGATACGTTACAAATCTTGTTGTCGACCTTGCAATTTTGATAGAGGCAAAAGAAGAGTCGGAGCTGCCGGAGTATATTCTTGGAACAGTCCGATTAAACCGTTTGAAACCTGAATCTGCTGTACCATTGGAACTGTCCGATTAA 2238 0.4281 MDAVATGSELNKSRSGGSERSDDSGGGIFESSGWVYHLGVNSIGHEYCHLRFLFIRGKYIAMYKRDPHESPGIKPIRRGVVGPTLMVEELGRRKVNNGDLYVLRFYNRLDETKKGDIACATAGEARGWMEAFDQAKQQAEHELSRGVSARDKLNMETEINLEGHRPRVRRYAHGLKKLIRIGQGPEKLLRQSSKLSARTDGFEGDVGDAVEAHQWKCVLTLAGIRIFEDVSDNKNGKTVLAKSVGVIDATADTVFEVILSTEQQKRYEWDTLICDLELIDSYDGHYDVVYGTYDSKYLSRWHSKQDFVFSRQWFRGQDGTYTILQCPAVHKKKPQIPGFRRAKVNPSSWEIRNLNTSMASNSPRCLVTHTLEIDSSSWCRWKNNQNSKFQRSIPHALLFQVAGLKEYIAANPALHHENATTVVHSKISDASISSAECEDEMQDEFYDAITADSSTSDEESDDDQKLVLQEPRVKLKNISWAIASLALKRTAAPDLSEELDPDVTPITIPSNLHGSLWKGKDDNDTNCWASPTGKGFMIRGKNYLKDSSKVVGGDPLLNLVGVDWLTVDKSVDRIALHPKCLVQSEAGKKLPFILVINLQVPAKPNYSLVLYYAADRPINKNSLLAKFVGGSDAFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFRQDNFLEIDVDIGSSSVARSVIGLVLGYVTNLVVDLAILIEAKEESELPEYILGTVRLNRLKPESAVPLELSD 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01233 745 Pfam START domain 237 378 IPR002913 GO:0008289
Phco8g01233 745 Gene3D - 208 419 IPR023393 -
Phco8g01233 745 ProSiteProfiles START domain profile. 215 374 IPR002913 GO:0008289
Phco8g01233 745 SUPERFAMILY Bet v1-like 209 378 - -
Phco8g01233 745 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 45 744 IPR045096 -
Phco8g01233 745 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 528 733 IPR009769 -
Phco8g01233 745 CDD START 211 408 - -
Phco8g01233 745 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01233 Phco-Chr8 12823090 12846640 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01233 8 12823090 12846640 Phco8g01233 8 12823090 12846640 ECH
Phco8g01233 8 12823090 12846640 Phco7g02486 7 43657624 43682328 PCT