Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01017 ATGGACGTCGCCGGAGGATCAATTAGAGCCGCCATATCACAGTGGGAGTTGGCGGTGTGGCGGCAGTACCAGCACGTGCTGGACAAGTGGACGCCGCTCGTGGGACGGCGGCGGGTGGGGTTGTTAGTGGTGGCGCTGATATACGCGCTGCGCGTGTTCTTGGTGGAAGGGTTCTACTTAGTGTCGTACGGTTTGGGAATCTACATTCTCAACCTTCTGATCGGGTTCCTCTCCCCTCAAGTGGACCCCGAGATTCTCGACGGCGACGGCCCTACACTCCCCTCCTCTGTTGACGACAAGTTTCGCCCCTTTGTTCGCCGCCTCCCCGAGTTCAAGTTCTGTTTCCATGCGGCACTGACTGTGCGGCTTGGGGTTGAGACTGGTGCTATTGCTTTGCCGAGCTTGGGGTTGAGACTGGTGTTGTTGCTTTGCCAAGGTTGGGTGAAGGGGTGGTTGGTGTTCTGCTCTAGTTTCTATGCGGCGCTGACTGTGCGGCTTGGGGTTGAGACTGGTGCTGCTGCTTTGCCAAGGTTGGGTGAAGGGGTGCTTGGGGTTGAGACTGGTGTTGTTGCTTTGCCAAGGTTGGTGTTCTGCTCTAGTTTCTATGCGGCACTGACTGTGCGGCTTGGGGTTGAGACTGGTGCTGCTGCTTTGCCAAGGTTGGGTGAAGGGGTGCTTGGGGTTGAGACTGGTGTTGTTGCTTTGCCAAGGTTGGTTGAAGGGGTGACTGGTGCTGCTGCTTTGCCAAGGTTGGGTGAAGGGGTGACTGGTGCTGCTGCTTTGCCGAGGTTGGGTGAAGGGGTGGTGAATTTTAATGGGGATACTAGGTTGAATGTGCTGGTTGATATTGTAAAATTGGCACAAAAGAGAGGCCTCAGGGGTAAGTTAGGAGACTGGAAAGAATTATTGGACACTCATGACAAAAGGTTTGGGTCCAATTTGAGTGATCCATCAAAGCGACCCCATGAGTTACTGGCTACATTTCTAACGTCGTTTTTGGAGGAGGAAGATTTGAAGTCTCCGGAGCAGAGGTTAGTTCAAATAACTCTGCAGCATCCGTTATATCCATTGGACTATTCATTTCCATCAATTGACGAGGGGTGTAAGGTTATAAATGTTAAAAACAAACCCAAGGTGATGAAGTCTACTACAATGCTTGCTGTTGATTGTGCAATGGTTCTTTGTGAAGATGGGACAGAAGCAGTAGTCAAAGTCTGTGTGGTAGACCATAATTTAGAGAAATCCATGAAGAAGTTGTTATCAAAAGGAACTATATTAGTGGGTCACGGTTTGCATAATGATCTACGTGCGCTGAAACTTGATCATGTCAGAGTCATTGACACTTCCTTTATCTTCCAATTCTTGGATGGATCTATGCACATAAGACCTTCTTTGAATAGTTTATGTCAGGCTGTGTTGGGTTGTGGTGTTCGGGTAAAAGGTGCTCCACATAATTGTCTAGATGATGCATGTGCAGCTATGAAGCTTGTTCGTGCAAAGATCAAACATGGTGTTGATAGGGAATTTCCAATTTCATTGGCTCAAGAGCATGTTCCAGAATGTGATACAGCAAAGCTTTTTCTTCACAAGATACCAACCACTGTAAACACTGAAGCACTGCATAACATTGTTCCTGGAGAATTCAGAACTGAACTGCAGCATTCCAAGAATGGCCAAGGAAGACATTATTCTGCCTTAGCTGTTTTTAAAAATCCACAGGAGGCTGATGAGGCCTATAAAAATGTCCAGGGAAGCCAATTAAAGGATACATATGGGCGTCCCCTGAAACTTGTAACATTTTGGCTAAGTACAGTTATGTTTGCCACTCTATTTGTTCGGAAAATGGTAAGTGATGAACCCAATGACCAGATTCATTCTAACAAGAGGGCTTTACAAACAGATGAGGCCGTTGATGTTTCCAAGAAAGCAAAGATAGATAACATCATTGAAGAGGATGATGCCCCAAGCAGTGATGCCCATTCAAATGAGATTGAAGCACTGAATCAACGCTTAAAGCAAAGGGAATTAGAGATCGAATCATTGAGGAAAGAGCTGACACAGAAAGATTTTGAAATATCCGCACTGCATAAAATGGTAGCCTCTTTAAATAAACGAAAAAATGTAGTTTCCATGCGGCACTGA 2142 0.4669 MDVAGGSIRAAISQWELAVWRQYQHVLDKWTPLVGRRRVGLLVVALIYALRVFLVEGFYLVSYGLGIYILNLLIGFLSPQVDPEILDGDGPTLPSSVDDKFRPFVRRLPEFKFCFHAALTVRLGVETGAIALPSLGLRLVLLLCQGWVKGWLVFCSSFYAALTVRLGVETGAAALPRLGEGVLGVETGVVALPRLVFCSSFYAALTVRLGVETGAAALPRLGEGVLGVETGVVALPRLVEGVTGAAALPRLGEGVTGAAALPRLGEGVVNFNGDTRLNVLVDIVKLAQKRGLRGKLGDWKELLDTHDKRFGSNLSDPSKRPHELLATFLTSFLEEEDLKSPEQRLVQITLQHPLYPLDYSFPSIDEGCKVINVKNKPKVMKSTTMLAVDCAMVLCEDGTEAVVKVCVVDHNLEKSMKKLLSKGTILVGHGLHNDLRALKLDHVRVIDTSFIFQFLDGSMHIRPSLNSLCQAVLGCGVRVKGAPHNCLDDACAAMKLVRAKIKHGVDREFPISLAQEHVPECDTAKLFLHKIPTTVNTEALHNIVPGEFRTELQHSKNGQGRHYSALAVFKNPQEADEAYKNVQGSQLKDTYGRPLKLVTFWLSTVMFATLFVRKMVSDEPNDQIHSNKRALQTDEAVDVSKKAKIDNIIEEDDAPSSDAHSNEIEALNQRLKQRELEIESLRKELTQKDFEISALHKMVASLNKRKNVVSMRH 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01017 713 Coils Coil 657 688 - -
Phco8g01017 713 SMART exoiiiendus 384 506 IPR013520 -
Phco8g01017 713 Pfam Rer1 family 18 118 IPR004932 GO:0016020
Phco8g01017 713 PANTHER PROTEIN RER1 9 118 IPR004932 GO:0016020
Phco8g01017 713 Gene3D - 410 510 IPR036397 GO:0003676
Phco8g01017 713 SUPERFAMILY Ribonuclease H-like 414 502 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01017 Phco-Chr8 10605551 10614318 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01017 8 10605551 10614318 Phco8g01017 8 10605551 10614318 ECH
Phco7g00155 7 979046 981105 Phco8g01017 8 10605551 10614318 ECH
Phco4g01146 4 9424707 9426298 Phco8g01017 8 10605551 10614318 PCT