Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00887 ATGGCCACGATGCTTCAGAGTGAAAAAGACCCTCCACAACCACCTTCACGTGGCTTTCTGGACACAGTTGAAGAAATCACCACAATATATAGGTCACTGCCACCTCGACCTTCCATTGAAGAGGTGGAAGCTGCCACGTCCACTGTGGATACCCTCAACAACGAGGAACAAACCAAACTCCACGAAATCTCTATCCAACAACCTCCTCACGATGTCCCTGCAGACCTCTTCTCTGTCCTGCAGCAACTCAAGAAGACCATGGTACTTTTCCACACCCACCAACACAGGAGAGAGGCTCTTCAACTTCTTGAGCTCGAAAAGATGTTTCAAACCTTCGGTGATCTCATTCAGAGGGCTTCTGAATTGGTCTCTGGAGATACCCAGAAGCAAAAGCTTCCCACTTTACCTGAAGAACTCGTTGTGATCACTGACCCAAGTGAAACGTTGGTGAAGGAAGAGGAAGAATCACAGAAGAATCATTTCCAAGTGATACAGCCTTCCTTGTCTAAAGGGAATGGAAGCATTGAGAAATTAAGTCTAATGAAAGTTGCTACTGTTATTGAAAGTTGTGCTGGTAGTGGAGCTACAACCCTTGAACTTAGAGGGAAGTTGGTGGATCAGATGGAATGGTTGCCGGTGTCAATTGGGAAATTATCTGATGTCACTGAAATGGACCTATCTGAAAACAAAATCATGGCTCTTCCTACAACCATTGTGGGTCTCAAGGCCTTAACAAAGCTTGATCTTCACTCAAACCAACTTATAAACCTTCCCCATTCATTTGGTGAATTGATAAACCTTGTTGATCTTGACCTCCACGCCAACAGATTGAAATCACTTCCTGCCACTTTCGGAAACTTGACAAACCTCATAGATCTAGACTTGAGCTCAAATGGGTTTACAAATTTACCAGAGACAATTGGGAATTTGAACAGCTTGAAGAGATTGAATGTTGAGACCAACGAGCTTGAGGAACTGCCTCACACAATTGGAAATTGCTTATTTCTATCTGCGCTCAGGTTAGATTTCAATCAGCTCAAGGCCCTACCTGAGGCAATTGGGAAGCTTGAATGGTTGGAGATTCTCACTTTCAAGTATAATAGAGTTAAGAGGCTGCCTTCCACAGTGGGTAATCTATGCAATTTGAAGGAACTTGATATTAGCTTTAATGAACTCGAATTTGTACCAGAAAACCTGTGTTTTGCAACTAATTTGAAGAAATTAAACTTGGGAAAGAACTTTGCGGACCTAAGAGCCTTGCCAACATCAATTGGAAATCTTGAAATGCTTGAGGAGTTAGATATAAGTGATAATCAAATAAAATCTTTACCAGAGTCCTTCAGGTTCTTGTCCAAGTTGAGAGTTTTTCGAGCTGATGATACCCCCCTTGAGGTGCCACCCAGAGAATTGGTCAAGTTGGATGCTCAGGAAGTTGTGCACTATATGGCTGATTTTGTCACCAAAAGGGACACAAAACTTGTGCCATCAAAGAAGAAAAAGAAGGGGTTTTGGTTCTGGTTTCGCTCCATATTTTGTTCCAAACTTGAATGA 1551 0.4255 MATMLQSEKDPPQPPSRGFLDTVEEITTIYRSLPPRPSIEEVEAATSTVDTLNNEEQTKLHEISIQQPPHDVPADLFSVLQQLKKTMVLFHTHQHRREALQLLELEKMFQTFGDLIQRASELVSGDTQKQKLPTLPEELVVITDPSETLVKEEEESQKNHFQVIQPSLSKGNGSIEKLSLMKVATVIESCAGSGATTLELRGKLVDQMEWLPVSIGKLSDVTEMDLSENKIMALPTTIVGLKALTKLDLHSNQLINLPHSFGELINLVDLDLHANRLKSLPATFGNLTNLIDLDLSSNGFTNLPETIGNLNSLKRLNVETNELEELPHTIGNCLFLSALRLDFNQLKALPEAIGKLEWLEILTFKYNRVKRLPSTVGNLCNLKELDISFNELEFVPENLCFATNLKKLNLGKNFADLRALPTSIGNLEMLEELDISDNQIKSLPESFRFLSKLRVFRADDTPLEVPPRELVKLDAQEVVHYMADFVTKRDTKLVPSKKKKKGFWFWFRSIFCSKLE 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00887 516 SMART LRR_typ_2 336 356 IPR003591 -
Phco8g00887 516 SMART LRR_typ_2 287 309 IPR003591 -
Phco8g00887 516 SMART LRR_typ_2 379 402 IPR003591 -
Phco8g00887 516 SMART LRR_typ_2 218 240 IPR003591 -
Phco8g00887 516 SMART LRR_typ_2 264 286 IPR003591 -
Phco8g00887 516 SMART LRR_typ_2 427 449 IPR003591 -
Phco8g00887 516 SMART LRR_typ_2 310 333 IPR003591 -
Phco8g00887 516 SMART LRR_typ_2 241 263 IPR003591 -
Phco8g00887 516 ProSiteProfiles Leucine-rich repeat profile. 429 450 IPR001611 GO:0005515
Phco8g00887 516 FunFam Plant intracellular Ras-group-related LRR protein 4 177 485 - -
Phco8g00887 516 SUPERFAMILY L domain-like 185 467 - -
Phco8g00887 516 Pfam Leucine rich repeat 266 323 IPR001611 GO:0005515
Phco8g00887 516 Pfam Leucine rich repeat 216 254 IPR001611 GO:0005515
Phco8g00887 516 Gene3D Ribonuclease Inhibitor 157 484 IPR032675 -
Phco8g00887 516 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 183 316 - -
Phco8g00887 516 SMART LRR_bac_2 427 446 - -
Phco8g00887 516 SMART LRR_bac_2 333 352 - -
Phco8g00887 516 SMART LRR_bac_2 379 398 - -
Phco8g00887 516 SMART LRR_bac_2 241 260 - -
Phco8g00887 516 SMART LRR_bac_2 287 306 - -
Phco8g00887 516 SMART LRR_bac_2 310 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00887 Phco-Chr8 9050188 9052496 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00887 8 9050188 9052496 Phco8g00887 8 9050188 9052496 ECH