Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00847 ATGGATCAATTGTCGGCGATCAGCGAGGACCTGGCCGAGATCGACGGGCAAATCGCCGACAATTTCCGCGCCCTATCAAATGGATTTCAGAAGTTGGAGAAGATTAAGGATTCGAATAGACAGAGCAGGCAGTTGGAAGAACTCACGGAGAAAATGAGAGAATGTAAACGGCTTATCAAGGAGTTCGATAAAGAAGTCAAAGCTTTGGAGAGTAGCTTTGATAGAGAAACCAACAAAATGCTGAATGAGAAAAAGCAGTCATTGATCAAAGAGTTAAACTCATATGTTGCTTTGAAAAAACAGTATGCTATAAACATTGAGCATAAACGAATTGAACTCTTTGAGGGGCCATCTGAAGGTTATGCTGAAGAAAATGGCTTGCTAGCATCCTCAATGACAAACGAACAGCTAATGGAACAGGGGAATAGGATGATGGATGATACAGATCAAGCCATTGAAAGGGGAAAGAAGGTCGTTCAAGAAACAATAAATGTTGGTACAGAGACTGCAGCAGCTCTTAAGGCTCAGACGGAACAAATGAGCAGAGTCGTCAATGAGCTGGATTCCATCCATTTCTCTTTAAAGAAAGCATCACAATTAGTGAAGGAAATCGGTAGGCAGGTTGCTACTGACAAGTGTATTATGGTGCTGCTTTTCCTTATTGTCGTGGGAGTAATTGCTATCATTATTGTGAAGCTTGTGCACCCGGGGAACAAGGACATTCGCGACATTCCAGGACTGGCTCCTCCAGTTCAGAACCGAAGACTGCTTTGGAGTCACAGTTGA 786 0.4313 MDQLSAISEDLAEIDGQIADNFRALSNGFQKLEKIKDSNRQSRQLEELTEKMRECKRLIKEFDKEVKALESSFDRETNKMLNEKKQSLIKELNSYVALKKQYAINIEHKRIELFEGPSEGYAEENGLLASSMTNEQLMEQGNRMMDDTDQAIERGKKVVQETINVGTETAAALKAQTEQMSRVVNELDSIHFSLKKASQLVKEIGRQVATDKCIMVLLFLIVVGVIAIIIVKLVHPGNKDIRDIPGLAPPVQNRRLLWSHS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00847 261 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 24 231 - -
Phco8g00847 261 SMART tSNARE_6 137 204 IPR000727 -
Phco8g00847 261 SUPERFAMILY SNARE fusion complex 132 205 - -
Phco8g00847 261 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Phco8g00847 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
Phco8g00847 261 Coils Coil 38 79 - -
Phco8g00847 261 FunFam novel plant SNARE 11 133 212 - -
Phco8g00847 261 Pfam Sec20 150 231 IPR005606 GO:0005484|GO:0006890
Phco8g00847 261 Gene3D - 133 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00847 Phco-Chr8 8607906 8613328 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00847 8 8607906 8613328 Phco8g00847 8 8607906 8613328 ECH