Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00775 ATGGCTCCACTCTTCATCTTGCAAATGTTTCTGCTTTTCAGTTGTTGCGTATTATTTCATGCAACAACTGTAACATGCACAAACCACCCTAAAATGTTGTCTACCACAAACTCATCCAAATGGGTCGGACCCTCCGGACACCGAGTAATCACCGTCGACATTAACGGCGGAGGCCATTTCCGATCAGTCCAAGCCGCCGTCAATGCTGTCCCGGACAACAACAGAATGAATGTCCTTATTCAGATAAGCCCCGGATATTACATAGAGAAGGTGGTAGTGCCCGTGACGAAGCCGTACATTACATTTGAAGGAGCGGGGAGAGATGTGACGGTGATAGAATGGCATGATAGGGCCAGTGACCCTGGTCCCAACGGCCAACAACTGCGTACTTACAGAACAGCTTCTGTTACAGTTTTTGCCAACTATTTCTGTGCTAGGAATATCGGCTTCAAGAACACTTCTCCGGCGCCGATGCCGGGAATGGAGGGGTGGCAAGCTGCGGCGTTTCGCATTTCAGGGGACAAAGCCTATTTCTCCGGCTGCGGGTTCTACGGTGCACAAGACACTCTTTGCGACGATGCTGGCCGTCATTACTTCAAAGAATGTTACATTGAGGGTTCCATAGATTTCATTTTCGGGAATGGCAGGTCCATGTACAAGGATTGCAGGCTACACTCAATTGCCACGAGGTTTGGGTCAATAGCAGCCCAAGATAGGAAATCCCCATACCAGAAAACAGGCTTCGCATTCGTACGGTGCAAGGTGACAGGAACAGGCCCGATTTATGTGGGCCGTGCAATGGGCGAGTACTCTAGGATTGTCTATGCCTACACCTACTTCGACAACATAGTTGCACATGGTGGTTGGGATGATTGGAACACTTCTTACAATAACAAGACTGTGTTCTTTGGAGTGTACAAATGCTGGGGACCAGGTGCTGCTGCTATACGTGGAGTCCCATTAGCCCAAGAGCTAGATTTTGAAACTGCTCATCCATTCCTGGTCAAGAGTTTTGTTAATGGGAGACACTGGATGGCACCCTCTGATGCTTAG 1053 0.4891 MAPLFILQMFLLFSCCVLFHATTVTCTNHPKMLSTTNSSKWVGPSGHRVITVDINGGGHFRSVQAAVNAVPDNNRMNVLIQISPGYYIEKVVVPVTKPYITFEGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFCARNIGFKNTSPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCRLHSIATRFGSIAAQDRKSPYQKTGFAFVRCKVTGTGPIYVGRAMGEYSRIVYAYTYFDNIVAHGGWDDWNTSYNNKTVFFGVYKCWGPGAAAIRGVPLAQELDFETAHPFLVKSFVNGRHWMAPSDA 350
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00775 350 FunFam Pectinesterase 45 347 - -
Phco8g00775 350 Pfam Pectinesterase 50 341 IPR000070 GO:0030599|GO:0042545
Phco8g00775 350 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 44 345 - -
Phco8g00775 350 ProSitePatterns Pectinesterase signature 2. 204 213 IPR033131 -
Phco8g00775 350 Gene3D - 45 349 IPR012334 -
Phco8g00775 350 SUPERFAMILY Pectin lyase-like 48 347 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco8g00775 Phco-Chr8 7776047 7779963 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00775 8 7776047 7779963 Phco8g00775 8 7776047 7779963 ECH