Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00764 ATGTACCAGAATAGCAAAGCAAACACAGCCTTGTTGGAGTTGTTAGCAAGAAACCGCAGCCTTGATTTTCTTCTATTATTGGATCGTCTTAACGAGGAAAGATTGTCTGCAATTAGAGGAAGAATGGCGACAAAGAGCTACTTCAAACAAGAGCATGATCTTGAGAAGAGAAGAGCTGAGGCTGCTAGAATCAGGGAGAAATACCCAGACCGTATCCCTGTGATTGTGGAGAAAGCAGAAAGAAGTGATATTCCAAGTATTGACAAGAAGAAGTACCTTGTCCCCGCTGATCTGACAGTTGGACAATTTGTCTATGTTATCCGCAAAAGGATTAAATTAAGTGCAGAGAAGGCAATATTTATCTTTGTGGACAACGTGCTTCCACCTACAGGAGCAATTATGTCTGCTATATATGAGGAGAAGAAGGAAGAGGATGGGTTTCTTTATGTTACTTACAGTGGGGAGAACACCTTTGGGGATCTGACTTCCCAGTAG 495 0.4202 MYQNSKANTALLELLARNRSLDFLLLLDRLNEERLSAIRGRMATKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKEEDGFLYVTYSGENTFGDLTSQ 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00764 164 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 42 159 IPR004241 -
Phco8g00764 164 CDD Ubl_ATG8 54 156 - -
Phco8g00764 164 SUPERFAMILY Ubiquitin-like 45 159 IPR029071 -
Phco8g00764 164 Gene3D - 31 159 - -
Phco8g00764 164 Pfam Autophagy protein Atg8 ubiquitin like 56 159 IPR004241 -
Phco8g00764 164 FunFam Autophagy-related protein 42 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00764 Phco-Chr8 7675033 7679383 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00764 8 7675033 7679383 Phco8g00764 8 7675033 7679383 ECH