Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00750 ATGCGTGTGAAGGAAATGCACCCCTTGTGCTGCATCTCACTGGAAAGTCCGGGGATCGGGAGCAACTCTCCGGAGCCCGAGGCTGCTGCGTTGTCCAGGACGAGGAGTCTCCCGGCCGGTGGATCTGATGGCATTGCTCGGCGGGGATCCGAGGCCACGGTGGCCGGAGTTCTCTACAAGTGGACCAATTACGGCAAGGGATGGAGATCCCGCTGGTTCCTCCTCCGCAATGGCGTTCTCTCCTATGCCAAGATCTGCTGGCCGGAAAACCTCAACCTCCTATCTCCGGTTGACGATGTACGCCTCATCGGAGAGGTCACCGCCAACCGCCTTGCCAGAGATGCCGCCACCGTGCGCCGGAAGAGTCACAAACCTCCTTCCTCCTCTTCCTCTGCCGTCGTGCATCTCAAGATCTCGTCATTCAGAGAGAGCAAGTCTGACGATAGACGGTTCTATATATTCACAGCCACAAAGACTCTCCATCTGAGAACTGATTCAAGGAAGGACCGTGTGGCGTGGATTCAAGCTTTGGTTTCAACCCGAGAATTATATCCTCTTCGAGCGCTCAGCGACCATCTCTCCCTCGCACCGAATCATATATCTGTATCAACAGAGAGGCTTAAGAAACGCTTACTTGAAGAGGGTAGCAGTGAGAGCCTTGTCAAGGAGTGCGAGCAAATCATGTTCGCCGAATTCTCTGAATTACAAGAGCAACTTCAGATCCTATGTCAAGAACGAAGGAATTTGCTTGATACAATAAGGCAGCTGGAGGCTGCTAATATTGAACCTGAGGCCTCTGCCTTGCATGACAGTGAATACCAATTAACGAAGAATGGCTTTTCAAGTTTAGGACATGGAAAATATAGCGAATGCAGTACTACTGAATCATCGGATGATATTGAGAAACAGGAGATGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGACACTAAAGAGTATTTTACAGAACTTGGTTTCAGGTGTGGGTCCACAGGAGATTTGGATCTAACGAACATGTCTGGGGAAGCTAACACACAATGCATTGATTTGGAGAACAATCTTATTGCGAAGACGGTCAATGATTTTGGGTACCCTCAGATAGCAAGGCGAAAGAAGCTTCCAGATCCTGTTGAGAAGGAAAAGGGCGTAAGTCTTTGGTCAATTATCAAAGACAACGTGGGCAAAGATCTCACACGAGTGTGTCTTCCTGTATACTTTAATGAGCCAATTTCATCTCTTCAGAAATGTTTTGAGGACTTGGAGTACTCCTTTCTTCTTGATAGAGCTTATGAGTACGGAAAAGCGGGAAACGGTCTCCTTCGGGCTCTGAATGTTGCTGCCTTTGCTGTTTCTGGATATGCATCATCCGAAGGTCGTCATTGTAAACCCTTTAATCCATTGTTAGGGGAAACTTATGAAGCGGATTATCCTGACAAAGGAGTTCGTTTCTTTTCCGAGAAGGTGAGTCACCATCCAACTGTCGTTGCCTGCCACTGTCAAGGTAGAGGATGGAAGTTCTGGGCTGACAGTAACATTCGGTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGTGTTCTGACCCTGGAGTTTGATGACGGTGAAATATTTCAGTGGAGCAAGGTCACGACAACAATTTATAATCTTATCCTTGGGAAAATATATTGCGATCATCATGGAAACATGGACATCCGTGGTAATCGCCAATATTCGTGCAGACTCAAGTTCAAAGAACAGGCGATTCTTGATCGAAATCCGCACCAGGTGCATGGCTTTGTTGAAGATGTAACGGGAAAAAAGGTTGCCACATTATTTGGCAAGTGGGATGACAGCATGTATTATGTTAATGGTGAAGCGAATGTGAAGCCAAAAGATTGCACTTTGCCAGGCACAAACTTCTTGTGGAAAAGGACTAAGCCTCCTTCTAATCTCACCCGGTACAATTTGACATCGTTTGCAATCACACTGAATGAGCTTACTCCTGGGCTAAAGGAGAAGCTTCCACCCACGGATTCCAGGCTGAGACCAGATCAGCGGCATCTAGAGGATGGGGAATACGAGAAGGCTAATATTGAAAAACAAAGGTTGGAAAAGAGGCAGAGAATGTCGAGGAAACTGCAAGAAAATGGATGGCAGCCTAGGTGGTTCCACAAAGAAGGTGAAAACGGGACGTTTCGATATATTGGCGGGTACTGGGAAGCGAGAGCTCTAGGAAGATGGAATGGATGCCCAAATATCTTCGGTGAAGTTTATGAAGGAAATTTTGATCCTATAGATGACGATAATGAATGCAAAATAGTGTCTGGAGGGTTTCTCTTGAACCTTCTTGCATGGCTGCAACTTATTTTACTGAATCGAAGGGAGGGGGGTAGCCTTTGGGAACCTACGGAAACAAGGCTATTTGCAGTTCTGGTAGGAGGACAGGTTTGTGGATTGCCCTTGTGTTTACGACTTTAA 2469 0.4678 MRVKEMHPLCCISLESPGIGSNSPEPEAAALSRTRSLPAGGSDGIARRGSEATVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKICWPENLNLLSPVDDVRLIGEVTANRLARDAATVRRKSHKPPSSSSSAVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRELYPLRALSDHLSLAPNHISVSTERLKKRLLEEGSSESLVKECEQIMFAEFSELQEQLQILCQERRNLLDTIRQLEAANIEPEASALHDSEYQLTKNGFSSLGHGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTKEYFTELGFRCGSTGDLDLTNMSGEANTQCIDLENNLIAKTVNDFGYPQIARRKKLPDPVEKEKGVSLWSIIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSFLLDRAYEYGKAGNGLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPDKGVRFFSEKVSHHPTVVACHCQGRGWKFWADSNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSCRLKFKEQAILDRNPHQVHGFVEDVTGKKVATLFGKWDDSMYYVNGEANVKPKDCTLPGTNFLWKRTKPPSNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLEDGEYEKANIEKQRLEKRQRMSRKLQENGWQPRWFHKEGENGTFRYIGGYWEARALGRWNGCPNIFGEVYEGNFDPIDDDNECKIVSGGFLLNLLAWLQLILLNRREGGSLWEPTETRLFAVLVGGQVCGLPLCLRL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00750 822 MobiDBLite consensus disorder prediction 17 45 - -
Phco8g00750 822 SUPERFAMILY PH domain-like 51 179 - -
Phco8g00750 822 FunFam oxysterol-binding protein-related protein 1D isoform X1 472 643 - -
Phco8g00750 822 SMART PH_update 52 184 IPR001849 -
Phco8g00750 822 FunFam Oxysterol-binding protein-related protein 2A 682 753 - -
Phco8g00750 822 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 53 739 IPR000648 GO:0008289
Phco8g00750 822 Gene3D - 472 632 - -
Phco8g00750 822 ProSiteProfiles PH domain profile. 51 182 IPR001849 -
Phco8g00750 822 Gene3D - 48 183 IPR011993 -
Phco8g00750 822 Gene3D - 682 738 - -
Phco8g00750 822 Coils Coil 232 259 - -
Phco8g00750 822 SUPERFAMILY Oxysterol-binding protein-like 381 761 IPR037239 -
Phco8g00750 822 Pfam Oxysterol-binding protein 386 739 IPR000648 GO:0008289
Phco8g00750 822 Pfam Pleckstrin homology domain 56 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00750 Phco-Chr8 7541270 7550681 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00750 8 7541270 7550681 Phco8g00750 8 7541270 7550681 ECH