Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00747 ATGGATTTGAAGTCCTCTCATGTTTCTCCTGTTCTCACTGACCCTGTTCCCGTCAACAAGTCAAGGCTTCGAATGCATTCTAGTCTGCTAGCTTATTCCCAGCAAGATTCACCTGTCTCTCCAGGGAAGTGCTCAAGAAGCAATTCAAGGAAAAGTACGGGGAGTGTCGATGATGTGAGGTCCAATGGTTGGTTGGATGCCATGAAGGCTTCTTCCCCTCCAAGGAAGAAGCTACTTAAAGGATCCAGTGTTCAGGTTGCTTCAATTGACTTTGAGATTGAAGACTATTGTACATGGATGCTTGAATATCCTTCAGCACTGGACTCTTTTGAGAACATCGTTGACCTTGCTCAGAATAAGAAGATTGTCATGTTTCTAGATTATGACGGCACACTTTCACCGATAGTAGATGATCCGGATTGTGCCTTTATGTCCGAATCTATGCGTACAACTGTAAGAAGTGTGGCAAAATATTTCCCCACAGCAATCATCAGTGGAAGAAGCCGTGACAAGGTTTTCGATCTTGTTAAACTAACAGAACTCTACTACGCTGGTAGTCATGGGATGGACATTATTGGCCCTGTTAGTGAGACTCTGTCCAAAAATCACCCAAATTGTGTAAAGTCTACAGACCATGAGGGAAAGGAAATAACTCTCTTTCAACCTGCGAGAGAATTCCTGCCTATGGTTGATGAGGTTTTTAGAACCCTCGTCGAGATTACTAAAGATATACAAGGTGCAAAAGTTGAAAACCACAAATTTTGCGTTTCTGTACATTACCGTAATGTAGAGGAGAATAATTGGACAACAATTGGACAACGTGTCCATGATGTCTTGCAAAATTACCCTCGTTTACGTTCAACTCATGGACGGAAGGTTTTAGAAGTCCGTCCTGTGGTTGATTGGAATAAAGGAAAAGCTGTTGAGTTTTTACTTGAATCTCTAGGATTAAATGATAGTGATGATGTGCTTCCCATCTACATTGGAGATGATAAAACTGATGAAGATGCATTCAAGGTGCTGCGAGAAAGCAGTAGAGGTTATGGGATTTTGGTTTCGTCGGTGAGAAAAGAAAGCAATGCCTTCTACTCTCTCCGAGACCCCAATGAGGTCATGAAATTTCTCCAACTCTTGGTGAACTGGAAGAGACAAGAAAGATAG 1161 0.4212 MDLKSSHVSPVLTDPVPVNKSRLRMHSSLLAYSQQDSPVSPGKCSRSNSRKSTGSVDDVRSNGWLDAMKASSPPRKKLLKGSSVQVASIDFEIEDYCTWMLEYPSALDSFENIVDLAQNKKIVMFLDYDGTLSPIVDDPDCAFMSESMRTTVRSVAKYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPVSETLSKNHPNCVKSTDHEGKEITLFQPAREFLPMVDEVFRTLVEITKDIQGAKVENHKFCVSVHYRNVEENNWTTIGQRVHDVLQNYPRLRSTHGRKVLEVRPVVDWNKGKAVEFLLESLGLNDSDDVLPIYIGDDKTDEDAFKVLRESSRGYGILVSSVRKESNAFYSLRDPNEVMKFLQLLVNWKRQER 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00747 386 NCBIfam HAD-IIB family hydrolase 124 343 IPR006379 -
Phco8g00747 386 SUPERFAMILY HAD-like 123 383 IPR036412 -
Phco8g00747 386 NCBIfam trehalose-phosphatase 120 379 IPR003337 GO:0003824|GO:0005992
Phco8g00747 386 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 32 385 IPR044651 GO:0004805|GO:0005992
Phco8g00747 386 MobiDBLite consensus disorder prediction 34 60 - -
Phco8g00747 386 Pfam Trehalose-phosphatase 125 368 IPR003337 GO:0003824|GO:0005992
Phco8g00747 386 FunFam Trehalose 6-phosphate phosphatase 122 211 - -
Phco8g00747 386 CDD HAD_TPP 123 373 - -
Phco8g00747 386 Gene3D - 218 386 IPR023214 -
Phco8g00747 386 Gene3D - 122 210 IPR023214 -
Phco8g00747 386 MobiDBLite consensus disorder prediction 34 59 - -
Phco8g00747 386 FunFam Trehalose 6-phosphate phosphatase 229 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00747 Phco-Chr8 7489206 7491732 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00747 8 7489206 7491732 Phco8g00747 8 7489206 7491732 ECH