Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00725 ATGGTAAAATTAAAGCAGAAAATTGATTACAAAAGTTTATGTAGAAGGCTAGACATAGAACTAGACAAACTCACCATGGAATACCAAAGGCAGCAGAAGGAATTTCATGAGGATATTGAAGGATTCACCACAGAAGGACAGCATCAGATATCAGAGACCCAAAAAGGCTATTCGGATTCACTGGAGAAGGAAAGAATGAAATATCAGAAAAACTACAAGGAATCAATTAAGGTGCTAGAAGAGAAGGTGATGGAGAATAAGAAAAAGTACGAGGATTTTTGTATGACATCTACTGGAGAGATGGCCATTGTGCCTGCTGAGGAGGTAGTCATTTTGAAAAAAATACTTCAGAAAGAGACTCTTATAAGAAATGCTACCGAAGGGGAGCTAAATCATCTGAAAAATCAAATGGAAGAAATGAAAATGTCGGAGGCATCAAGAGAGTCAGATATCTCAAAACTTCGTAAGATGTTGGAAGATGAGGCACACCAGAAGGAGAAACTCAAAGGAGAAATAGCCAGATTGCAAAGTCAACTGCTGCAGTTAGGTTCTGAAGTTGGAAAAACAAAACAAAAAATTCGTCGAGGTGGATTTGAGAAAGTTGCTGGTGGTTTAGATTATTTTCCCCCTTTCCTGGTTAAACATCCACAGCAAGCTTCAGGAAATGGAGAGGAGGCCTCGGTTGCCAAGCTCTGTGAACATGGGGGATTGCAGAAGATTCTGTCATTGCTTGAAGCAGAAAATGCTGATGCACAAATCCATGCCGTGAAAATAATAGCTAATTTAGCTTGTGAAGAAAGAAACCAGAAGAAGATTGTAGAAGCAGGTGGACTTACGTCCTTGCTTACACTGCTTAAGAACTCAAAAGATGAGACCACACATAGAATTGCAGCAAGCGCCATAGCAAATTTGGCAATGAATGAAACCAATCAAGATCTCATTGCGGCTCAAGGAGGCATTTATTTACTATCAATGACAGCAGCCAATGCTGAAGATCCTCAGACTCTTCGAATGGTTGCTGGAGCAATAGCTAATCTTTTTGGCAATGATAAACTACAAATAAAGATAAGGGATGAAGGTGGTATGAAGGCACTGTTGGGAATGGCCAGATGCAAACATCCCGATGTACATACCCAGGTTGCCCGCGCAATAGCCAACTTTGCAAAATGCGAGTCTAAAGCGTCTATTCAAGGGAGAAAGGTTGGAAGGTCTTCACTTATTGTGGACGGTTTGCTTCCATGGATAGTGCAAAACGCAAGTAATGAAGTCTCGTTAGTGAGGCGTGACATTGAGATTGCTCTCTGCCATTTGGCAAAACATGAAGCAAATGCAAGAGACATGATTAGTGGAGGTGCAATAGGAGAGTTGGTTCGAGTCTCAAGAAATTGTTCAAGAGTAGACATAAGGATTCTTGCACGTGAAACACTAATCTCCAACCCCGCATTCCAACCTGAAATTAGGCGTTCGGTAGAAACTCAAAGAAGTTCGTCATCATTTTAA 1500 0.4093 MVKLKQKIDYKSLCRRLDIELDKLTMEYQRQQKEFHEDIEGFTTEGQHQISETQKGYSDSLEKERMKYQKNYKESIKVLEEKVMENKKKYEDFCMTSTGEMAIVPAEEVVILKKILQKETLIRNATEGELNHLKNQMEEMKMSEASRESDISKLRKMLEDEAHQKEKLKGEIARLQSQLLQLGSEVGKTKQKIRRGGFEKVAGGLDYFPPFLVKHPQQASGNGEEASVAKLCEHGGLQKILSLLEAENADAQIHAVKIIANLACEERNQKKIVEAGGLTSLLTLLKNSKDETTHRIAASAIANLAMNETNQDLIAAQGGIYLLSMTAANAEDPQTLRMVAGAIANLFGNDKLQIKIRDEGGMKALLGMARCKHPDVHTQVARAIANFAKCESKASIQGRKVGRSSLIVDGLLPWIVQNASNEVSLVRRDIEIALCHLAKHEANARDMISGGAIGELVRVSRNCSRVDIRILARETLISNPAFQPEIRRSVETQRSSSSF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00725 499 Coils Coil 69 89 - -
Phco8g00725 499 SMART arm_5 265 306 IPR000225 GO:0005515
Phco8g00725 499 SMART arm_5 349 389 IPR000225 GO:0005515
Phco8g00725 499 SMART arm_5 307 348 IPR000225 GO:0005515
Phco8g00725 499 SMART arm_5 223 264 IPR000225 GO:0005515
Phco8g00725 499 Coils Coil 123 143 - -
Phco8g00725 499 SUPERFAMILY ARM repeat 224 476 IPR016024 -
Phco8g00725 499 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 276 319 IPR000225 GO:0005515
Phco8g00725 499 Pfam Armadillo/beta-catenin-like repeat 267 305 IPR000225 GO:0005515
Phco8g00725 499 Coils Coil 151 185 - -
Phco8g00725 499 Gene3D - 112 478 IPR011989 -
Phco8g00725 499 PANTHER VACUOLAR PROTEIN 8 222 483 IPR045156 GO:0043495|GO:0071562
Phco8g00725 499 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 235 277 IPR000225 GO:0005515
Phco8g00725 499 Coils Coil 14 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00725 Phco-Chr8 7248493 7254117 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00725 8 7248493 7254117 Phco8g00725 8 7248493 7254117 ECH