Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00676 ATGGCTGTTTCCTGCTGGACCTTTTTATTTGCTGCTCTTTCTGGGATTCTTTTCTCAACTCAACTCTCTGCTTCCCAAAAAGTTCCGAACTACACATTTATGCGCAATGCAACGACGGCACCAGACATCTCATATTATGACTACATCATAATTGGCGGCGGCACAGCCGGTTGTCCTCTAGCTGCGACGCTGTCCCAGAATTACAGCGTGTTGCTCCTTGAACGTGGTGGCTCACCCTACGGTAACCCCAACATCAGCAACTTAGCAGCCTTCGGTGCTGCCCTATCTGACATCTCCCCTACCTCTCCCGCTCAGCGTTTTATCTCCGAAGACGGCGTCATCAACTCAAGAGCCCGCGTCCTCGGCGGTGGAAGTTGCTTGAACGCTGGCTTTTACACTCGCGCCAGCCCTCAATATGCAAGGGAAGCGGGGTGGGATGGAAGGGCAGTGAATGAGTCGTACGAATGGGTGGAGAAGGTAGTGGCGTTTGAGCCAGAAGTGAAGCAGTGGCAGTCGGCTGTTCGGGAAGGACTGCTTGAGATAGGGGTTGTGCCTAATAATGGCTTCAGTTATGATCACATTGGTGGCACTAAGGTAGGGGGCACCATCTTTGACCACCAAGGCTTCCGACACACCGCTGCTGATCTTTTGCAATATGCCAACCCCTCTGCAATTACCCTCCTTCTGCATGCCACCGTCCACAGGATCCTTTTTAGAGTCAAAGATGGATCAAAACCAATGGCCCATGGAGTGGTGTTCAGAGATTCATTGGGTCGTAAACACAGGGCGTACCTGAAGCACCATCCCAGGAGCGAGATCATTGTTTCGGCTGGTGCGCTTGGAAGCCCACAACTTCTAATGTTGAGTGGCGTTGGGCCGGCAGAGCATCTTCGGGCCCATAACATCAGTATAACATTGGACCAGCCATTGGTTGGCCAGGGAATGTCAGATAACCCCATGAATGCCATCTTCATCCCATCTCCTCAACCGGTGGAGGTATCTCTGATTCAGGTGGTGGGCATCACCAGTTTTGGCAGTTACATTGAAGCTGCCAGTGGTGAAAACTTCGCCGGTGGTTCCCCTAGGGACTACGGAATGTTCTCCCCCAAGATTGGTCAACTGTCGAGGGTGCCCCCAAAGCAAAGGACCCCAGAGGCCCTTGCTAAGGCAACAGAAGTGATGCAGAGTCTGGACCAAGCAGCCTTCAGGGGAGGGTTCATCCTGGAGAAGATAATGGGTCCGATTTCAAGCGGGCATTTGGAGCTCCGAAGCCGCGATCCAAACCAGAACCCATCAGTGACCTTCAACTACTTCCAGGACCCCCGAGACTTGGAGAGGTGCGTGCAGGGCCTTAGCGTGGTGGAGAAGATAATCGAATCCAAGGCATTCGCTCCCTTCAGATACCCCAACATGCCACTCTCAGTGCTTCTCAACATGACCGCAAATTCCCCCGTTAACTTGCTGCCCAAACACACCAATTCCTCCCTCTCTCTCCAACAGTTCTGCAGAGACACTGTGATGACCATTTGGCACTACCACGGAGGTTGCCAAGTTGGGAAAGTGGTCGACAGGGACTACAAGGTTCTTGGTGTGGATGCCCTTCGCGTTATCGATGGCTCCACCTTTAAATACTCTCCTGGGACTAATCCTCAGGCCACCGTTATGATGCTTGGCCGGTACATGGGACTTCAAATACTGACTCAGAGAGTTGGTGGGCCTGCTGCAGATCAAACAGACCAATAG 1743 0.5261 MAVSCWTFLFAALSGILFSTQLSASQKVPNYTFMRNATTAPDISYYDYIIIGGGTAGCPLAATLSQNYSVLLLERGGSPYGNPNISNLAAFGAALSDISPTSPAQRFISEDGVINSRARVLGGGSCLNAGFYTRASPQYAREAGWDGRAVNESYEWVEKVVAFEPEVKQWQSAVREGLLEIGVVPNNGFSYDHIGGTKVGGTIFDHQGFRHTAADLLQYANPSAITLLLHATVHRILFRVKDGSKPMAHGVVFRDSLGRKHRAYLKHHPRSEIIVSAGALGSPQLLMLSGVGPAEHLRAHNISITLDQPLVGQGMSDNPMNAIFIPSPQPVEVSLIQVVGITSFGSYIEAASGENFAGGSPRDYGMFSPKIGQLSRVPPKQRTPEALAKATEVMQSLDQAAFRGGFILEKIMGPISSGHLELRSRDPNQNPSVTFNYFQDPRDLERCVQGLSVVEKIIESKAFAPFRYPNMPLSVLLNMTANSPVNLLPKHTNSSLSLQQFCRDTVMTIWHYHGGCQVGKVVDRDYKVLGVDALRVIDGSTFKYSPGTNPQATVMMLGRYMGLQILTQRVGGPAADQTDQ 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00676 580 PIRSF Alcohol_oxidase 21 573 IPR012132 GO:0050660
Phco8g00676 580 Pfam GMC oxidoreductase 46 319 IPR000172 GO:0016614|GO:0050660
Phco8g00676 580 SUPERFAMILY FAD-linked reductases, C-terminal domain 315 515 - -
Phco8g00676 580 SUPERFAMILY FAD/NAD(P)-binding domain 45 568 IPR036188 -
Phco8g00676 580 ProSitePatterns GMC oxidoreductases signature 2. 278 292 IPR000172 GO:0016614|GO:0050660
Phco8g00676 580 Gene3D - 46 558 IPR036188 -
Phco8g00676 580 Gene3D - 163 508 - -
Phco8g00676 580 PANTHER OSJNBA0019K04.7 PROTEIN 15 569 - -
Phco8g00676 580 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00676 Phco-Chr8 6774793 6780687 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00676 8 6774793 6780687 Phco8g00676 8 6774793 6780687 ECH