Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00663 ATGGCGAGGCCTAATCAAGAGGCGGTTGAGACTTTCGTCAGCATCACTGGCTTGCCTGAGGCAGTAGCGCTGCAAAAACTCGAGGAACATGGTGGTAATCTCAATCAAGCAGTCAATGCACATTTTAGTGAAGGAGACAGAAACCTAACGGCTGGCTCTCACAACAGCTCTACAGCATTTCCTCAAGAGGATTTCATGGATATAGATGATCAACACAATGCAGATATTCACAGAATTCCATCACTTCCAGCTTTAGCACCAAATCTAAATCCATTTTCTCTTCTTGATTCCACTATTGGGAGAGGTATGTTTGGCACTCCTCTTGATCCGGCAGTTCAGGCACCATTTGTTACACATCCTAGAGAGGTAAGGGAGATTCCTATAGAGGTTAAGGATGGTAACCAATCCACTACTCAACCTGGTCGTGTTCCATCTATTGAAGATGTCACTGGAACTGTTGATACCCATGGTCCAGATATCCATGGGACTGTCATAATCAATGATGAAGATGATGACAATGCTCCACCTGCCCAGATTGCACATCGAGATGAGCAAAACGATAAGATATTGGCTGATACTTCACTCAATAGCAGTGCTAGACCTAGTGCCCCTGAATCTGACAATTTACCAGATTATGGCAATGAGATAGAAGAAGAAATGCTTCGGGCAGCCATTGAGGCTTCTAAACGGGAGGCTGAGGAAAATTACAGAAATCACAAACTTGGCAGACAAACTGACTCAAGTGAATCAGGATCACAGTCAAGGCAATCTTATTTGGAGGATCCTGAGCTTGCCCATGCAGTTTCATTGTCCCTGAAGACAGCTGAGCAAGAAAAAGCATGGCGTGTACAGGGAGGAGATTCTGAATCTGCACCAGCAGGGCCATCTAAGTCATCAGAGGCTGGACTAGGGGAAGTGGCCTCTAATGGAAGGTTGCAGACAGGAAGCTTGTCCTTTCATGATGAAACTGAAGATGTAGAGGAGCAGCCACTCGTTAGGAACAGGTCTAGACATATATCTTCAGGATCCACAGGATCAGTCAAAGATGTTGAATTTGCCGAGGCTAGCACACTACCAAGCACAGCACCACAGGAGACCAGTAATCCTCCTAATAGAAATTCCTTTCCCTCCGAGGAGTGGGGTGGTATATCTTCAGAGGAACATGATGAAGCAGTAATGCTTGAAGCTGCAATGTTTGGTGGAATCCCGGAAGGGACTGGATATCAGTATGCTTATGCACCACATGAGTTTATGCAAGGTAGGGGGTCTAATCCTCGTGCCCCATATCGCCCACCTTCACCATCACTGGCAGCACAGCGTTTGATAAGGGAACAGCAGGATGATGAATATCTCGCATCATTACAAGCAGACAGAGAAAAAGAATTGAAGGAAGCCGAGGCTGCTCGTGAAGAGGAAAGACGGATAGCAGAAGAATCCCGCAGGAAATTACAGGAAGAGCAGGAATTGGAAACACAGTTAGCCGCCAAAGAAGTTTCACTGCCACCAGAACCATCATCAGATGATGATAACGCTGTTAACTTGCTGGTAAAAATGCCAGATGGCAACCGTCGTGGACGCCGATTCCTAAGATCTAATAGACTACAGTCTCTGTTCGACTTCATAGATATCGGTAGGATGGTGAAACCAGGCAGTTACAGACTGGTGAGACCATATCCTAGGCGTGCCTTTAGTGATGGAGAAAGTGCTGCGAGCTTGGCTGAACTTGGCCTAACCAACAAGCAAGAAGCTTTGTTTTTGGAGTTAATCTGA 1770 0.4605 MARPNQEAVETFVSITGLPEAVALQKLEEHGGNLNQAVNAHFSEGDRNLTAGSHNSSTAFPQEDFMDIDDQHNADIHRIPSLPALAPNLNPFSLLDSTIGRGMFGTPLDPAVQAPFVTHPREVREIPIEVKDGNQSTTQPGRVPSIEDVTGTVDTHGPDIHGTVIINDEDDDNAPPAQIAHRDEQNDKILADTSLNSSARPSAPESDNLPDYGNEIEEEMLRAAIEASKREAEENYRNHKLGRQTDSSESGSQSRQSYLEDPELAHAVSLSLKTAEQEKAWRVQGGDSESAPAGPSKSSEAGLGEVASNGRLQTGSLSFHDETEDVEEQPLVRNRSRHISSGSTGSVKDVEFAEASTLPSTAPQETSNPPNRNSFPSEEWGGISSEEHDEAVMLEAAMFGGIPEGTGYQYAYAPHEFMQGRGSNPRAPYRPPSPSLAAQRLIREQQDDEYLASLQADREKELKEAEAAREEERRIAEESRRKLQEEQELETQLAAKEVSLPPEPSSDDDNAVNLLVKMPDGNRRGRRFLRSNRLQSLFDFIDIGRMVKPGSYRLVRPYPRRAFSDGESAASLAELGLTNKQEALFLELI 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00663 589 MobiDBLite consensus disorder prediction 230 244 - -
Phco8g00663 589 MobiDBLite consensus disorder prediction 163 187 - -
Phco8g00663 589 Gene3D - 211 284 - -
Phco8g00663 589 SUPERFAMILY UBA-like 2 44 IPR009060 GO:0005515
Phco8g00663 589 CDD UBX 513 587 - -
Phco8g00663 589 Pfam UBA-like domain 6 46 - -
Phco8g00663 589 SMART uim 216 235 IPR003903 -
Phco8g00663 589 SMART uim 259 278 IPR003903 -
Phco8g00663 589 MobiDBLite consensus disorder prediction 131 145 - -
Phco8g00663 589 PANTHER FAS-ASSOCIATED PROTEIN 11 588 - -
Phco8g00663 589 Pfam UBX domain 508 587 IPR001012 GO:0005515
Phco8g00663 589 MobiDBLite consensus disorder prediction 131 187 - -
Phco8g00663 589 Gene3D - 1 45 - -
Phco8g00663 589 Coils Coil 451 496 - -
Phco8g00663 589 MobiDBLite consensus disorder prediction 245 259 - -
Phco8g00663 589 SMART ubx_3 504 588 IPR001012 GO:0005515
Phco8g00663 589 Gene3D - 508 588 - -
Phco8g00663 589 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 217 235 IPR003903 -
Phco8g00663 589 CDD UBA_Ubx1_like 6 42 - -
Phco8g00663 589 MobiDBLite consensus disorder prediction 230 260 - -
Phco8g00663 589 MobiDBLite consensus disorder prediction 279 386 - -
Phco8g00663 589 SUPERFAMILY Ubiquitin-like 470 585 IPR029071 -
Phco8g00663 589 MobiDBLite consensus disorder prediction 461 484 - -
Phco8g00663 589 MobiDBLite consensus disorder prediction 357 380 - -
Phco8g00663 589 ProSiteProfiles UBX domain profile. 507 585 IPR001012 GO:0005515
Phco8g00663 589 MobiDBLite consensus disorder prediction 318 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00663 Phco-Chr8 6639221 6643192 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00663 8 6639221 6643192 Phco8g00663 8 6639221 6643192 ECH