Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00642 ATGGTCATAGAGGTTTCCTCCGGTTCCCACTTCTCCGGTTGGCATCCTTCAACGACGTCGTCTTCTTCTCATCCCCCCTTCATCATTGGTGTCGCTGGAGGCACTGCATCGGGGAAAACCACTGTGTGCGACATTATCATTCAGCAACTGAAAGATCACAGAGTTGTGCTCCTCTGTCAGGATTCATTCTACCGCGGTTTGACGAATGATGAGTTGAAACGCGTTCATGAGTATAACTTTGATCATCCTAATGCATTTGACACAGAGCAACTAGTAGAAACCCTCGACCAGCTTAAATCTGGACAGTCTGTTCAGATTCCAATATATGATTTCAAGCTTCATCAGAGATCTACCGACAGATCCCGACAGGTCAATGGATCTGATGTAATCATTATGGAGGGTATATTGGTTTTTCATGAACAACGTGTCCGCAACATGATGAATATGAAGATATTTGTTGATGCAGATCCAGATGTGAGGCTTGCCCGCAGAATAAAACGTGATACAGTTGAGAGGGGTAGAGATGTACAATCGGTACTGGAACAGTATGCAAAATTTGTTAAGCCTGCTTATGAAGATTTTATTCTTCCATCCAAAAAATATGCTGACATCATAATACCTCGCGGGGGAGAGAATCGTGTAGCAATTGACTTGATTGTTCAACATATTCGTACTAAGCTTGGCCAACATAACCTCTGCAAAATATATCCGAATTTGAATATTCTAAAGTCTACTTTCCAGACCAGAGGCATGCACACTCTTATTCGTGATAGGGACATATCAAAGCATGATTTTGCTTTTTATTCAGATCGGCTAATTCGTTTGGTAGTGGAACACGGTCTTGGTTACTTGCCGTTTACAGAAAAACAAGTTATCGCACCTACAGGCTCAATTTATACTGGAGTTGATTTTTGTAAGAAATTGTGCGGAGTATCCATTGTTCGAAGTGGCGAAAGTATGGAAAATGCCTTGCGTGCTTGCTGTAAAGGAATAAAGATCGGAAAAATTCTCATTCACCGCGATGGAGATGAAACCCAGCTTATTTATGAGAAGCTTCCTAGAGATATTTCGGAGAGACATGTTCTTCTCATGGACCCAGTACTTGGTACAGGTAACACTGCGAGCGAAGCAATCGAGCTTCTAAAAAAGAAGGGAGTTCCAGAGTCCCAGATAATATTCCTTAACCTCATTTCTGCTCCTGAGGGCATACAATGTGTATGTAAACGTTTTCCGCATCTGAAAATTGTCACATCGGAGATCGAAGAAGGATTAAATGACCAGTTCCAGGTCATACCAGGGTTGGGAGAATTTGGAGACCGCTACTTTGGTACGGACGATTCGTAG 1344 0.4241 MVIEVSSGSHFSGWHPSTTSSSSHPPFIIGVAGGTASGKTTVCDIIIQQLKDHRVVLLCQDSFYRGLTNDELKRVHEYNFDHPNAFDTEQLVETLDQLKSGQSVQIPIYDFKLHQRSTDRSRQVNGSDVIIMEGILVFHEQRVRNMMNMKIFVDADPDVRLARRIKRDTVERGRDVQSVLEQYAKFVKPAYEDFILPSKKYADIIIPRGGENRVAIDLIVQHIRTKLGQHNLCKIYPNLNILKSTFQTRGMHTLIRDRDISKHDFAFYSDRLIRLVVEHGLGYLPFTEKQVIAPTGSIYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDETQLIYEKLPRDISERHVLLMDPVLGTGNTASEAIELLKKKGVPESQIIFLNLISAPEGIQCVCKRFPHLKIVTSEIEEGLNDQFQVIPGLGEFGDRYFGTDDS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00642 447 PANTHER URIDINE KINASE 18 354 - -
Phco8g00642 447 CDD PRTases_typeI 303 417 IPR000836 -
Phco8g00642 447 CDD UMPK 28 226 IPR000764 -
Phco8g00642 447 MobiDBLite consensus disorder prediction 1 22 - -
Phco8g00642 447 Pfam Uracil phosphoribosyltransferase 244 444 - -
Phco8g00642 447 ProSiteProfiles UvrC family, homology region profile. 114 215 IPR001162 GO:0009381
Phco8g00642 447 FunFam Uridine kinase 23 229 - -
Phco8g00642 447 Pfam Phosphoribulokinase / Uridine kinase family 28 214 IPR006083 GO:0005524|GO:0016301
Phco8g00642 447 PRINTS Uridine kinase signature 26 43 - -
Phco8g00642 447 PRINTS Uridine kinase signature 158 168 - -
Phco8g00642 447 PRINTS Uridine kinase signature 56 67 - -
Phco8g00642 447 PRINTS Uridine kinase signature 101 116 - -
Phco8g00642 447 PRINTS Uridine kinase signature 172 183 - -
Phco8g00642 447 PRINTS Uridine kinase signature 194 207 - -
Phco8g00642 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 219 IPR027417 -
Phco8g00642 447 FunFam Uridine kinase 230 444 - -
Phco8g00642 447 SUPERFAMILY PRTase-like 229 445 IPR029057 -
Phco8g00642 447 Gene3D - 22 229 IPR027417 -
Phco8g00642 447 NCBIfam uridine kinase 26 226 IPR000764 -
Phco8g00642 447 Gene3D - 230 444 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00642 Phco-Chr8 6399803 6404426 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00642 8 6399803 6404426 Phco8g00642 8 6399803 6404426 ECH