Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00635 ATGGCACTGTTCCTTCTCTACGAATCTGCTTCGGGTTACGCTCTGTTCGAGGCTCATGGCCTCGACGAAATTGGTCAGAACACCGAAGCAGTTCGGAACTCCGTTTCCGACCTCAACAGGTTTGGGAAAGTCGTTAAGCTTCGTTCCTTCAATCCTTTCACTTCCGCTCTTGATGCCCTCAAGCAGTGCAATGCCGTCTCCGAAGGCATATTAACTGATGAGCTGAGAACTGTTTTGGAGACTAACTTGCCCAAAGTAAAGGAAGGTAAAAAGGTCAAGTTCAGTGTAGGTGTGTCTGATCCTAAGATTGGTTCGCAAATATCTGAAGTGTCAAAGATTCCTTGCCAGAGTAATGAGTTTGTGAGCGAACTTCTTCGTGGTGTGCGATTGCATTTTGATACCTTTGTTGGTGATCTCAAGTCTGGAGATTTGGAAAAGGCCCAACTTGGTCTAGGACATAGTTACAGCAGAGCGAAGGTGAAATTTAACGTCAATCGAGTGGACAACATGGTTATTCAAGCTATCTTCCTTCTTGATACACTTGATAAGGATATCAATTCGTTCTCCATGAGAGTGAGAGAATGGTATTCATGGCATTTTCCTGAGCTGGTGAAAATTGTAAATGATAATTATCTGTATGCCAAAGTTTCAAAATTTATTCAGGATAAGGCCAAGTTGACCGAAGACAATATTCCAGGCTTAACTGACATAGTTGGAGATGAAGATAAAGCGAAGGAGATTGTGGAAGCTGCCAAGGCCTCCATGGGTCAGGATTTGTCGCCAGTTGATTTGATCAATGTCCAACAATTTGCACAGAGGGTAATGGATCTGTCCAAGTACAGGAAGAACCTGTATGATTACCTGGTTGCTAAAATGAATGATATTGCACCAAATTTGGCCTCTTTGATTGGGGAAGTTGTTGGTGCTCGTTTGATTTCACATGCTGGTAGTCTCACAAATTTAGCTAAGTGCCCCTCATCAACTCTTCAAATTCTTGGTGCAGAGAAGGCTTTGTTCAGGGCATTAAAAACCAGAGGAAACACTCCCAAATATGGTTTAATATTCCACTCTTCTTTTATTGGTCGGGCATCTGCCAAAAATAAGGGCAGAATGGCTCGTTACCTTGCAAACAAATGCTCAATTGCATCACGAATTGACTGCTTTTCTGAAAAAGGTACTACTATTTTTGGGGAGAAACTCCGTGAACAAGTTGAGGAACGACTCGACTTTTATGACAAGGGCGTTGCTCCTCGCAAGAACTTAGATGTCATGCAGTCTGCCATTGAAAGTGCTGAAAACAAAGATACAGAGATGGAAACAGAAGCTGCCGTTGAAGTTTCAGACAAGAAAGCCAAAAAGAAGAAACATAAATCTGCTGCTGACGAAGGTAGTGACATGATTGTAGACAAGCCTACAAAAGTTACAAATGGTGATGCTGTGGAGGATCATAAGTCAGAGAAGAAAAAGAAAAAGAAAGAAAAGAGGAAGTTGGACCCGGAGACGGAGCATGAGGATCAAGCTGAAGACGATGGTGCCAATGGGGTCGTGAGTGAGCAGGACGGAACATCTAAAAAAAAGAAGAGTAAGAAGGTTAATAATGTAGTGGAGGCTGGTGAAGAGTCGAAGAAGAAGAAAAAGAAATCAAAAAAGGAAAGCGAGTAA 1662 0.4242 MALFLLYESASGYALFEAHGLDEIGQNTEAVRNSVSDLNRFGKVVKLRSFNPFTSALDALKQCNAVSEGILTDELRTVLETNLPKVKEGKKVKFSVGVSDPKIGSQISEVSKIPCQSNEFVSELLRGVRLHFDTFVGDLKSGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVSKFIQDKAKLTEDNIPGLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSKYRKNLYDYLVAKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRIDCFSEKGTTIFGEKLREQVEERLDFYDKGVAPRKNLDVMQSAIESAENKDTEMETEAAVEVSDKKAKKKKHKSAADEGSDMIVDKPTKVTNGDAVEDHKSEKKKKKKEKRKLDPETEHEDQAEDDGANGVVSEQDGTSKKKKSKKVNNVVEAGEESKKKKKKSKKESE 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00635 553 FunFam Nucleolar protein 56 140 298 - -
Phco8g00635 553 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 3 544 IPR045056 GO:0030515|GO:0031428|GO:0032040
Phco8g00635 553 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Phco8g00635 553 SUPERFAMILY Nop domain 163 412 IPR036070 -
Phco8g00635 553 Gene3D Nop domain 299 422 IPR042239 -
Phco8g00635 553 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Phco8g00635 553 MobiDBLite consensus disorder prediction 432 468 - -
Phco8g00635 553 SMART NOSIC_2 170 222 IPR012976 -
Phco8g00635 553 MobiDBLite consensus disorder prediction 430 553 - -
Phco8g00635 553 Coils Coil 421 441 - -
Phco8g00635 553 MobiDBLite consensus disorder prediction 520 553 - -
Phco8g00635 553 Gene3D - 140 298 - -
Phco8g00635 553 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Phco8g00635 553 FunFam Nucleolar protein 56 299 411 - -
Phco8g00635 553 MobiDBLite consensus disorder prediction 475 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00635 Phco-Chr8 6345938 6349215 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00635 8 6345938 6349215 Phco8g00635 8 6345938 6349215 ECH