Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00618 ATGAAATCTACAGTGAAAAGCCCAACACTGGGAGGCCATGGAAGTCCACTGCACATATTTACACTTGACACGCGCAACCCAGACCGGAATTCCGCAATGGCTGCCTCTCCAATCTTCCACTCTTCAGCACTCCCCTTTCACCTTCGCCTTCCCAAAACCTTCTCACACTCTTCACCAATGAGCATATCGGCATCTCCGCGTTTCGATCTGGTGATTCGATTCGGTCTAGTTCGATTTGGTGCACTGCAGTTCGTTTTGGTCTACGCGGTTAAGTTTGGTACAGTGTCGTCCAATACGATGCGGTCTACTATATATGACTCAGAAATAAAGGGGAAAAAAGAAGACTGCATTTGGAGGGTAAAGGAAGCAAACGCAAACGCAAAAGCGATAGCGGCAGTGATGGAAGCAGAAGAGGGTTCTCAGCAGCCACAGTTGGTACTCGCCGACAAGCTATTCCTTCTCCGCCAACCCGATGTGCAGGACATTGACAAGGTTCGCTACAAAGAGGATGTTTTCAATCACGTCAAGGAAAACGATATGGTCCCTTTGTACGAAACCCTAGTCGCCGATTCCGTGTTGGACATGGATCGTGCCCTTTTGGATTCCATGCGCGCTAAAACTGAGGACGAACTTAACAAGATCGACGAAAAGATTGCCGATGCGGAGGAAAACTTAGGTGAGAGTGAAGTTCGGGAGGCTCACTTGGCAAAATCCTTGTTTTTCATCCGAATTGGGGACAAGGAGAAAGCCTTGGAACATCTCAAGATAACAGAAACCAAGACAGTTGCAGTCGGCCAGAAGATGGACCTGGTGTTTTATACTTTGCAGCTTGGTTTCTTTGACATGGATTTTGATCTCATTTCCAAAAGCATTGACAAAGCCAAAAATTTGTTTGAAGAAGGTGGTGATTGGGAAAGGAAGAATAGGCTGAAAGTGTATGAAGGCCTGTACTGCATGTCCACTCGAAATTTCAAGAAGGCTGCCAAGTTGTTTTTGGATTCTATTTCAACCTTTACAACCTATGAACTCTTTCCTTACGACACCTTCATATTTTATACGGTTTTGACCAGCATTATATCATTGGACAGAGTTTCCTTAAAGCAAAAGGTAGTAGATGCTCCAGAGATCTTGACAGTGATCGGCAAAATCCCATTTCTTTCAGAGTTTTTGAACTCCTTGTATGATTGTCAATACAAGTCTTTCTTCTCAGCATTTGCTGGTCTGACGGAGCAGATTAAGTTGGACCGCTATCTGCATCCCCATTTCCGATATTACATGAGGGAGGTCAGAACTGTTGTGTACTCCCAATTTTTGGAATCTTACAAAAGTGTGACAATTGAAGCCATGGCCAAAGCTTTTGGAGTGACAGTGGATTTCATTGATCTGGAGCTATCACGTTTTATTGCAGCAGGGAAACTTCATTGTAAGATTGATAAGGTTGCTGGTGTTCTTGAAACTAACCGCCCTGATGCCAAGAATGCCCTTTACCAAGCAACTATTAAGCAAGGGGACTTCCTATTGAATCGGATTCAGAAATTGTCACGTGTTATAGATCTTTAG 1560 0.4423 MKSTVKSPTLGGHGSPLHIFTLDTRNPDRNSAMAASPIFHSSALPFHLRLPKTFSHSSPMSISASPRFDLVIRFGLVRFGALQFVLVYAVKFGTVSSNTMRSTIYDSEIKGKKEDCIWRVKEANANAKAIAAVMEAEEGSQQPQLVLADKLFLLRQPDVQDIDKVRYKEDVFNHVKENDMVPLYETLVADSVLDMDRALLDSMRAKTEDELNKIDEKIADAEENLGESEVREAHLAKSLFFIRIGDKEKALEHLKITETKTVAVGQKMDLVFYTLQLGFFDMDFDLISKSIDKAKNLFEEGGDWERKNRLKVYEGLYCMSTRNFKKAAKLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVIGKIPFLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVDFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00618 519 FunFam 26S proteasome regulatory subunit N7 144 470 - -
Phco8g00618 519 Pfam 26S proteasome subunit RPN7 196 369 IPR045135 -
Phco8g00618 519 SUPERFAMILY "Winged helix" DNA-binding domain 415 496 IPR036390 -
Phco8g00618 519 Gene3D - 158 470 - -
Phco8g00618 519 Coils Coil 204 231 - -
Phco8g00618 519 ProSiteProfiles PCI domain profile. 323 491 IPR000717 -
Phco8g00618 519 PANTHER 26S PROTESOME SUBUNIT 6 135 519 IPR019585 -
Phco8g00618 519 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 420 503 IPR000717 -
Phco8g00618 519 Pfam PCI domain 387 487 IPR000717 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00618 8 6189655 6199405 Phco8g00618 8 6189655 6199405 ECH