Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00613 ATGGCTTCGAGTGAGGGGTTTCTGACGGACGGGCAGAGGGAACTGCTAAAAATTGCGAGTCAAAATGCGGAGATTCTGTCTTCCTCTCCAAAATCCCCGTCCTCCTTGCTGTCTGACCATCATGTGAAAGCCCCAGCTGGTGGTAAGGCACAAACCGCTGGGATAGCCGTGAGGCATGTGCGTCGGTCACACTCTGCGAAGTATGGGCGGGTGAAGAAAGATGGTGCTGGTGGTAAAGGCACTTGGGGGAAATTGCTTGATACTGATATTGTTTCTCACATAGATCGAAATGATCCAAATTATGACAGTGGCGAGGAACCCTATCAACTGGTTGGATCTACTGTTACTGACCCCTTGGATGAATTCAAGAAAGCAGTGGTATCCATCATTGAGGAATATTTTAGTAATGGGGATGTGGAATTGGCAGCATCTGACCTCAAAGAACTTGGCTCAAGTGAATACTATCCATACTTCATTAAACGCCTTGTGTCCATGGCAATGGACAGGCACGATAAGGAGAAAGAAATGGCTTCTGTTCTTCTTTCTGCATTGTATGCTGATGTCATCAGCCCTGCACAGATCAGGGATGGGTTTTTTATTCTTCTCGAATCTGCCGATGATCTTGCTGTGGATATACTGGATGCAGTTGATATTCTTGCATTATTCTTGGCACGGGCTGTTGTTGATGACATTCTTCCTCCAGCCTTTCTTGCCAGGGCAATGAAGGCACTTCCAGATTCATCCAAGGGAGTTCAGGTAATCCAGACTGCTGAAAAGAGTTATCTCTCAGCTCCACACCATGCAGAGCTTGTGGAAAGGCGATGGGGTGGTAGCACTCACATAACTGTTGAAGAAGTGAAGAAGAAGATAGCTGATTTACTTAGAGAATATGTGGGTAGTGGTGACACATTGGAAGCCTGTAGGTGTATACGTGAGTTGGGGGTTTCATTCTTCCATCATGAGGTTGTTAAGAGGGCTTTGGTACTTGCCATGGAGATCCGTTCAGCAGAACCTCTAATGTTGAAATTATTAAAAGAAGCAGCAGAAGAAGGACTTGTTAGTTCCAGCCAAATGGTGAAGGGTTTTTCTCGTTTGGCAGAATCCCTAGATGATCTTGCTCTTGATATTCCGTCAGCTAAGGCATTGTTTCAGTCATTTGTCCCTAAGGCAATATCTGAAGGATGGCTTGATGCTTCACTTACCAAACCTGCAACTGAAGATGGGGAAATACAAGTTGAAGACGAGCAGGTGAAGAAGTACAAAAAGGAATCTGTAACTATAATTCATGAGTATTTTCTTTCTGATGACATTCCTGAACTGATTCGAAGTCTTGAAGAAATTGGAGCTCCTGAGTATAACCCTATATTTTTGAAGAAGTTAATAACTCTAGCTATGGATCGAAAGAACAGAGAAAAGGAAATGGCATCTGTACTGCTATCTGCACTTCACATAGAGATTTTCTCAACTGAGGATATAGTTAATGGTTTTGTCATGCTTCTGGAAACTGCGGAAGATACAGCACTGGATATACTGGACGCTTCAAATGAGCTTGCTCTGTTTTTAGCTCGGGCTGTTATTGACGATGTATTGGCCCCACTGAATTTGGAAGAAATTGGCAGCAGGTTGCCACCAAAGTGTAGTGGTAGTGAAACTGTGCGTATGGCAAGGTCACTCATAGCTGCTCGTCATGCTGGGGAGAGGCTATTGAGATGTTGGGGTGGAGGCACGGGATGGGCTGTGGAGGATGCCAAGGACAAGATCACGAAGCTCTTGGAAGAGTACGAAAGTGGAGGGGTTGTCAGTGAAGCTTGCCAATGTATCCGTGACCTGGGAATGCCTTTCTTTAATCACGAGGTAGTGAAGAAAGCTTTGATTATGGCCATGGAGAAAAAGAATGATCGAATGCTAGATCTACTGCAGGAGTGCTATAGTGAGGGTCTGATCACCATTAATCAGATGACTAAAGGTTTCACCCGAATTAAGGATGGTCTTGATGATCTGGCTCTGGACATTCCAAACGCAAAGGAGAAATTTGGCTTCTATGTGGAGCATGCTCAGTCGAAGGGCTGGCTTCTACCATCATTTGACTCGCCTACTACAGATGCCTAA 2109 0.4486 MASSEGFLTDGQRELLKIASQNAEILSSSPKSPSSLLSDHHVKAPAGGKAQTAGIAVRHVRRSHSAKYGRVKKDGAGGKGTWGKLLDTDIVSHIDRNDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSIIEEYFSNGDVELAASDLKELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFILLESADDLAVDILDAVDILALFLARAVVDDILPPAFLARAMKALPDSSKGVQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVGSGDTLEACRCIRELGVSFFHHEVVKRALVLAMEIRSAEPLMLKLLKEAAEEGLVSSSQMVKGFSRLAESLDDLALDIPSAKALFQSFVPKAISEGWLDASLTKPATEDGEIQVEDEQVKKYKKESVTIIHEYFLSDDIPELIRSLEEIGAPEYNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLETAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKITKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALIMAMEKKNDRMLDLLQECYSEGLITINQMTKGFTRIKDGLDDLALDIPNAKEKFGFYVEHAQSKGWLLPSFDSPTTDA 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00613 702 ProSiteProfiles MI domain profile. 582 701 IPR003891 -
Phco8g00613 702 PANTHER PROGRAMMED CELL DEATH 4 5 696 IPR039778 GO:0045892
Phco8g00613 702 Gene3D - 410 563 - -
Phco8g00613 702 Gene3D - 114 262 - -
Phco8g00613 702 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
Phco8g00613 702 FunFam Programmed cell death protein 4 568 701 - -
Phco8g00613 702 SUPERFAMILY ARM repeat 417 575 IPR016024 -
Phco8g00613 702 SMART ma3_7 286 397 IPR003891 -
Phco8g00613 702 SMART ma3_7 420 531 IPR003891 -
Phco8g00613 702 SMART ma3_7 122 233 IPR003891 -
Phco8g00613 702 SMART ma3_7 583 692 IPR003891 -
Phco8g00613 702 FunFam programmed cell death protein 4 409 563 - -
Phco8g00613 702 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Phco8g00613 702 Gene3D - 570 698 - -
Phco8g00613 702 Gene3D - 272 405 - -
Phco8g00613 702 ProSiteProfiles MI domain profile. 419 540 IPR003891 -
Phco8g00613 702 FunFam programmed cell death protein 4 113 264 - -
Phco8g00613 702 SUPERFAMILY ARM repeat 579 695 IPR016024 -
Phco8g00613 702 SUPERFAMILY ARM repeat 282 403 IPR016024 -
Phco8g00613 702 Pfam MA3 domain 584 691 IPR003891 -
Phco8g00613 702 Pfam MA3 domain 421 530 IPR003891 -
Phco8g00613 702 Pfam MA3 domain 122 233 IPR003891 -
Phco8g00613 702 Pfam MA3 domain 286 397 IPR003891 -
Phco8g00613 702 MobiDBLite consensus disorder prediction 26 54 - -
Phco8g00613 702 SUPERFAMILY ARM repeat 119 279 IPR016024 -
Phco8g00613 702 FunFam Programmed cell death protein 4 271 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00613 Phco-Chr8 6154008 6157715 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00613 8 6154008 6157715 Phco8g00613 8 6154008 6157715 ECH